| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474054
Identifier: 13474054
GI number: 13474054
Start: 3849056
End: 3849781
Strand: Direct
Name: 13474054
Synonym: mlr4841
Alternate gene names: NA
Gene position: 3849056-3849781 (Clockwise)
Preceding gene: 13474050
Following gene: 13474056
Centisome position: 54.7
GC content: 61.57
Gene sequence:
>726_bases ATGACCACGCAGCCTGATCCCGCCCGCTTCGCCCATGTCACCGACTGGGTGTTCGACCTCGACAACACGCTCTATCCGCA TCATTCGAATCTGTTCTCGCAGATCGACGTCAAGATGACCGCCTATGTCGGGGAACTGCTGGCGCTGCCGCGCGAGGAGG CGCGCAAGCTGCAGAAGGAGCTTTATCTCGAATATGGCACGACGCTGAACGGGCTGATGACGCGCCATGGCATCGATCCC GATGATTTCCTCGAGAAGGTGCATGACATCGACTATTCTTGGCTGGTGCCCGACCCTGTCCTGGGCACCGCCATCCGCCA GCTCCCCGGCCGCAAGTTCATCTTCACCAATGGCGATCGCCGGCACGCCGAGCGCACCGCGCGCCAGCTAGGCATTCTCG ACCATTTCGACGACATTTTCGATATCGTCGCCGCCGGCCTCAATCCCAAGCCGGCGCGCCAGACCTACGAGAAGTTCGCC GAGCTGCATGCCGTTACCGGCCACAATGCGGTGATGTTCGAGGACCTCGCCCGCAACCTGGAGGTGCCGAAGGCACTGGG CATGACCACCGTGCTCGTCGTGCCGCGCAATTTCGAGCCGACCTTCGCCGAGATCTGGGAACGCGACCCCGCGCAGGAAG ACGATGTCGATTTCGTCACCGACGATCTGGCGGCGTTTTTGACGGCGATAGTTGCGGGAGAACGAGCAGTAGGCAGTAGG GAATAG
Upstream 100 bases:
>100_bases CTTAAAATTTGAATCGTGAGGCCATTTCTGCCACTAAAAGCGCGTGGAAGTTGTGGATAAAGTCTCTTTCAGAATCCGCG TTTCATGCCATAAGGGGCGC
Downstream 100 bases:
>100_bases GCAGTAGGCAGTAGGGGGAAATTGATCTGGAAGCAGCGACTGCAAACGCCTTATTCTCCTACTGCCTACTGCCTACTGCC TACTGCCCTTATTCCCCTAA
Product: putative hydrolase, ripening-related protein-like
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTTQPDPARFAHVTDWVFDLDNTLYPHHSNLFSQIDVKMTAYVGELLALPREEARKLQKELYLEYGTTLNGLMTRHGIDP DDFLEKVHDIDYSWLVPDPVLGTAIRQLPGRKFIFTNGDRRHAERTARQLGILDHFDDIFDIVAAGLNPKPARQTYEKFA ELHAVTGHNAVMFEDLARNLEVPKALGMTTVLVVPRNFEPTFAEIWERDPAQEDDVDFVTDDLAAFLTAIVAGERAVGSR E
Sequences:
>Translated_241_residues MTTQPDPARFAHVTDWVFDLDNTLYPHHSNLFSQIDVKMTAYVGELLALPREEARKLQKELYLEYGTTLNGLMTRHGIDP DDFLEKVHDIDYSWLVPDPVLGTAIRQLPGRKFIFTNGDRRHAERTARQLGILDHFDDIFDIVAAGLNPKPARQTYEKFA ELHAVTGHNAVMFEDLARNLEVPKALGMTTVLVVPRNFEPTFAEIWERDPAQEDDVDFVTDDLAAFLTAIVAGERAVGSR E >Mature_240_residues TTQPDPARFAHVTDWVFDLDNTLYPHHSNLFSQIDVKMTAYVGELLALPREEARKLQKELYLEYGTTLNGLMTRHGIDPD DFLEKVHDIDYSWLVPDPVLGTAIRQLPGRKFIFTNGDRRHAERTARQLGILDHFDDIFDIVAAGLNPKPARQTYEKFAE LHAVTGHNAVMFEDLARNLEVPKALGMTTVLVVPRNFEPTFAEIWERDPAQEDDVDFVTDDLAAFLTAIVAGERAVGSRE
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321214, Length=202, Percent_Identity=27.2277227722772, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27332; Mature: 27201
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQPDPARFAHVTDWVFDLDNTLYPHHSNLFSQIDVKMTAYVGELLALPREEARKLQKE CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LYLEYGTTLNGLMTRHGIDPDDFLEKVHDIDYSWLVPDPVLGTAIRQLPGRKFIFTNGDR HHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCEEEEECCCH RHAERTARQLGILDHFDDIFDIVAAGLNPKPARQTYEKFAELHAVTGHNAVMFEDLARNL HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC EVPKALGMTTVLVVPRNFEPTFAEIWERDPAQEDDVDFVTDDLAAFLTAIVAGERAVGSR CCCHHHCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCC E C >Mature Secondary Structure TTQPDPARFAHVTDWVFDLDNTLYPHHSNLFSQIDVKMTAYVGELLALPREEARKLQKE CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LYLEYGTTLNGLMTRHGIDPDDFLEKVHDIDYSWLVPDPVLGTAIRQLPGRKFIFTNGDR HHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCEEEEECCCH RHAERTARQLGILDHFDDIFDIVAAGLNPKPARQTYEKFAELHAVTGHNAVMFEDLARNL HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCC EVPKALGMTTVLVVPRNFEPTFAEIWERDPAQEDDVDFVTDDLAAFLTAIVAGERAVGSR CCCHHHCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA