| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is envR [C]
Identifier: 13474047
GI number: 13474047
Start: 3843636
End: 3844268
Strand: Direct
Name: envR [C]
Synonym: mlr4833
Alternate gene names: 13474047
Gene position: 3843636-3844268 (Clockwise)
Preceding gene: 13474045
Following gene: 13474049
Centisome position: 54.63
GC content: 56.87
Gene sequence:
>633_bases ATGAAAATCGACGGTGAGACCAGATCGGCGCGTAAGGATCGTGAGATCATCCAGGCGGCCACCGCGGCGTTCATCAGCAA GGGTTATGACGGGACCAGCATGGAGGAAATCGCCACCAAAGCGGGGGCTTCCAAGCAGACCGTCTACAAGCATTTCACCG ACAAGGAGACGCTGTTCGGCGAAGTCGTTCTGTCAACCGCTAGCCAGGTCAACGACATCATCGAGTCCGTGACGACGCTG CTTTCCGAGGCGATATTCATGGAAGGCGGCCTGCAGCAGCTTGCCCGACGTCTGATAGCGGTGCTCATGGATGAAGAGCT GTTGAAGCTGCGGCGCTTGATCATCGCCAACGCGGATCGAATGCCACAGCTTGGCCGCGCTTGGTACGAAAAAGGCTTTG AGCGCATGCTTGCCTCGACGGCGTCCTGCTTTCAAAAGCTCACCAATCGAGGACTGATACAAACCGGTGATCCCTATCTG GCAGCCAGCCATCTTTTTGGAATGCTTCTTTGGATCCCCATGAATGAAGCCATGTTCACGGGAAGCAACCGGCGCTCCAA GGCCGAACTGGAACGGCACGCGGATGCCTCGGTGGAGGCATTTCTTGCCGTCTATGGGGTCCAGCCGAAATAG
Upstream 100 bases:
>100_bases GTCTAAGCCTTGCCTTCGTTGACAGGTACTAGTCAGTCCAGTACCGTTTTATGGCTACCATGTGGGAACGGTACCGTCTA GTACTGGTTAGGAGGGCGCC
Downstream 100 bases:
>100_bases TCCCGTTGCCCGCCGACATTAGCGGTAACGCCGCCAACACATCGCACCCCTATCATCCAGGGGTGTCCGACCCCTCGGCC TTCAGCCGCGCAAGCTGGGC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Transcription Regulator Protein; TetR-Family Transcriptional Regulator; TetR-Type Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcription Regulator Protein TetR Family; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein Tetr Family; Transcriptional Regulator Protein TetR Family; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; TetR Family Transcriptional Regulatory Protein; Bacterial Regulatory Protein; Transcriptional Regulator TetR/AcrR Family; Bacterial Regulatory Protein TetR Family Protein; Transcription Regulator Protein Tetr Family; Transcriptional Regulator TetR; TetR Family Regulatory
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKIDGETRSARKDREIIQAATAAFISKGYDGTSMEEIATKAGASKQTVYKHFTDKETLFGEVVLSTASQVNDIIESVTTL LSEAIFMEGGLQQLARRLIAVLMDEELLKLRRLIIANADRMPQLGRAWYEKGFERMLASTASCFQKLTNRGLIQTGDPYL AASHLFGMLLWIPMNEAMFTGSNRRSKAELERHADASVEAFLAVYGVQPK
Sequences:
>Translated_210_residues MKIDGETRSARKDREIIQAATAAFISKGYDGTSMEEIATKAGASKQTVYKHFTDKETLFGEVVLSTASQVNDIIESVTTL LSEAIFMEGGLQQLARRLIAVLMDEELLKLRRLIIANADRMPQLGRAWYEKGFERMLASTASCFQKLTNRGLIQTGDPYL AASHLFGMLLWIPMNEAMFTGSNRRSKAELERHADASVEAFLAVYGVQPK >Mature_210_residues MKIDGETRSARKDREIIQAATAAFISKGYDGTSMEEIATKAGASKQTVYKHFTDKETLFGEVVLSTASQVNDIIESVTTL LSEAIFMEGGLQQLARRLIAVLMDEELLKLRRLIIANADRMPQLGRAWYEKGFERMLASTASCFQKLTNRGLIQTGDPYL AASHLFGMLLWIPMNEAMFTGSNRRSKAELERHADASVEAFLAVYGVQPK
Specific function: Potential Regulator Protein For The Acref/Envcd Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23357; Mature: 23357
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDGETRSARKDREIIQAATAAFISKGYDGTSMEEIATKAGASKQTVYKHFTDKETLFG CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHH EVVLSTASQVNDIIESVTTLLSEAIFMEGGLQQLARRLIAVLMDEELLKLRRLIIANADR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MPQLGRAWYEKGFERMLASTASCFQKLTNRGLIQTGDPYLAASHLFGMLLWIPMNEAMFT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHCCCHHHCC GSNRRSKAELERHADASVEAFLAVYGVQPK CCCCHHHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKIDGETRSARKDREIIQAATAAFISKGYDGTSMEEIATKAGASKQTVYKHFTDKETLFG CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHH EVVLSTASQVNDIIESVTTLLSEAIFMEGGLQQLARRLIAVLMDEELLKLRRLIIANADR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MPQLGRAWYEKGFERMLASTASCFQKLTNRGLIQTGDPYLAASHLFGMLLWIPMNEAMFT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHCCCHHHCC GSNRRSKAELERHADASVEAFLAVYGVQPK CCCCHHHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA