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The map label for this gene is bkdR [H]

Identifier: 13474044

GI number: 13474044

Start: 3841571

End: 3842047

Strand: Reverse

Name: bkdR [H]

Synonym: mll4830

Alternate gene names: 13474044

Gene position: 3842047-3841571 (Counterclockwise)

Preceding gene: 13474046

Following gene: 13474043

Centisome position: 54.61

GC content: 64.15

Gene sequence:

>477_bases
ATGCCTCAATTCGACGATTTCGAGATCAAGATGCTCGATGTGCTGCAACGCGACGGGCGCAAACCCGTCTCCGAACTGGC
GCAAGAGATCGGCCTGTCGACGACGCCTTGCGCGCGGCGCTTCGAGGCACTGCAGGATGCCGGCATCATCAAGGGTTTTG
CCGCGGTGATCAGCCGCCGCGCGGTCGGCCTGACGGTCGAGGTGTTCATCCAGGTGCGCCTTGTCAGCCACAGCGACGGC
TCGCCCGAAAGCTTCATTGCAGCCGTGCAGCGCATGGACGAAGTGTCGTCATGCTGGACGATGACCGGTGACCACGACTT
CCTGCTGCATGTCATGGTGCCGTCGGTCGACGAGCTCAACGCCTTCGTCATGCACCGGCTGATGCGGCTCGACGGCGTGC
GCGACGTCCACACGCAGCTGGTGCTGCAGAACATCAAGGGACCCGGCCACGTGCCGCTCGCGCATCTGCGGCGGTGA

Upstream 100 bases:

>100_bases
GCAGGGTAGCCGGATTTGGCGAGGCAATTTGGTTTTGATGATGGCTCATTAGCGATATTCGGGATAACATTCCCTCACAA
TTGGCGACGGAGGAGTGAAA

Downstream 100 bases:

>100_bases
CGGTGCGTGCCTTGCGCATTCTTGCGGAGAAGCTGCACGCAAACTGCTGAAACGGGCCAATCGGGTGGCTAGATCGCCGT
CCAGCATATGCGGACCAATC

Product: transcriptional regulator (leucine-responsive)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPQFDDFEIKMLDVLQRDGRKPVSELAQEIGLSTTPCARRFEALQDAGIIKGFAAVISRRAVGLTVEVFIQVRLVSHSDG
SPESFIAAVQRMDEVSSCWTMTGDHDFLLHVMVPSVDELNAFVMHRLMRLDGVRDVHTQLVLQNIKGPGHVPLAHLRR

Sequences:

>Translated_158_residues
MPQFDDFEIKMLDVLQRDGRKPVSELAQEIGLSTTPCARRFEALQDAGIIKGFAAVISRRAVGLTVEVFIQVRLVSHSDG
SPESFIAAVQRMDEVSSCWTMTGDHDFLLHVMVPSVDELNAFVMHRLMRLDGVRDVHTQLVLQNIKGPGHVPLAHLRR
>Mature_157_residues
PQFDDFEIKMLDVLQRDGRKPVSELAQEIGLSTTPCARRFEALQDAGIIKGFAAVISRRAVGLTVEVFIQVRLVSHSDGS
PESFIAAVQRMDEVSSCWTMTGDHDFLLHVMVPSVDELNAFVMHRLMRLDGVRDVHTQLVLQNIKGPGHVPLAHLRR

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=32.8671328671329, Blast_Score=96, Evalue=9e-22,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=29.3333333333333, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790182, Length=141, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17687; Mature: 17556

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQFDDFEIKMLDVLQRDGRKPVSELAQEIGLSTTPCARRFEALQDAGIIKGFAAVISRR
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVGLTVEVFIQVRLVSHSDGSPESFIAAVQRMDEVSSCWTMTGDHDFLLHVMVPSVDELN
HCCHHHHHHEEEHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
AFVMHRLMRLDGVRDVHTQLVLQNIKGPGHVPLAHLRR
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHCC
>Mature Secondary Structure 
PQFDDFEIKMLDVLQRDGRKPVSELAQEIGLSTTPCARRFEALQDAGIIKGFAAVISRR
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AVGLTVEVFIQVRLVSHSDGSPESFIAAVQRMDEVSSCWTMTGDHDFLLHVMVPSVDELN
HCCHHHHHHEEEHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
AFVMHRLMRLDGVRDVHTQLVLQNIKGPGHVPLAHLRR
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]