Click here to switch to the map view.

The map label for this gene is 13474030

Identifier: 13474030

GI number: 13474030

Start: 3827723

End: 3828283

Strand: Direct

Name: 13474030

Synonym: mlr4813

Alternate gene names: NA

Gene position: 3827723-3828283 (Clockwise)

Preceding gene: 13474029

Following gene: 13474031

Centisome position: 54.4

GC content: 62.92

Gene sequence:

>561_bases
ATGCGCTTGCCGTCATTCAGGATCATCGCCATTTCCGCCCTCGTCACCGGCGTGGCGATCGCCACCCCCGCCTACGCCAA
GAACCCTGTTGTCGGCGGCGCGCCGATGTACACCACCAAGAACATCGTCGAGAATGCCGTCAATTCGAAGGATCACACGA
CGCTGGTCGCTGCCGTCAAGGCCGCCGCCCTGGTCGACACGCTGCAGGGCGCCGGCCCGTTCACCGTCTTCGCACCGACC
AACGAGGCCTTCGCGGCACTGCCGGCCGGCACGGTCGACACGCTGCTCAAGCCCGAGAACAAGGACAAGCTCACCAAGGT
GCTGACCGCGCATGTCGTGGCCGGCAAGATTTCAGGCGCCGAGATGATGAAGCAGGCCAAGGCGATGGGCGGCAAATACG
AGATGAAGACCGTCTCCGGCGACACGCTCACCGCCGAGGTCAAGAAGGGCAAGCTTTACATCATGGATGAGTCCGGCGGC
GAGGCGAAGGTGACCATCGCCGACGTCAACCAGTCGAACGGCGTCATCCATGTCGTCAACAAGGTGCTGTTGCCGAAGTA
A

Upstream 100 bases:

>100_bases
TTCCCGTGATCGGCGAAACTAGCGCGCCGGCAGCGGCGTGACTGCGGGTGCATTTCCAAGGCTATCAATTCCGATCAGCC
CTCACCCGGAGGAAGACCAC

Downstream 100 bases:

>100_bases
CGGCTTCCGGTGAAAGGGGCAGTGGCAGGTCGTTGGGGCTTTCTCGGTCTGCCATCCCCGCCTCATGACGAGGTGCCATG
TTTCTTGGGGAAGTCGTTTT

Product: secreted protein MPB70 (and transforming growth factor-induced protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRLPSFRIIAISALVTGVAIATPAYAKNPVVGGAPMYTTKNIVENAVNSKDHTTLVAAVKAAALVDTLQGAGPFTVFAPT
NEAFAALPAGTVDTLLKPENKDKLTKVLTAHVVAGKISGAEMMKQAKAMGGKYEMKTVSGDTLTAEVKKGKLYIMDESGG
EAKVTIADVNQSNGVIHVVNKVLLPK

Sequences:

>Translated_186_residues
MRLPSFRIIAISALVTGVAIATPAYAKNPVVGGAPMYTTKNIVENAVNSKDHTTLVAAVKAAALVDTLQGAGPFTVFAPT
NEAFAALPAGTVDTLLKPENKDKLTKVLTAHVVAGKISGAEMMKQAKAMGGKYEMKTVSGDTLTAEVKKGKLYIMDESGG
EAKVTIADVNQSNGVIHVVNKVLLPK
>Mature_186_residues
MRLPSFRIIAISALVTGVAIATPAYAKNPVVGGAPMYTTKNIVENAVNSKDHTTLVAAVKAAALVDTLQGAGPFTVFAPT
NEAFAALPAGTVDTLLKPENKDKLTKVLTAHVVAGKISGAEMMKQAKAMGGKYEMKTVSGDTLTAEVKKGKLYIMDESGG
EAKVTIADVNQSNGVIHVVNKVLLPK

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=133, Percent_Identity=34.5864661654135, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 19348; Mature: 19348

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPSFRIIAISALVTGVAIATPAYAKNPVVGGAPMYTTKNIVENAVNSKDHTTLVAAVK
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
AAALVDTLQGAGPFTVFAPTNEAFAALPAGTVDTLLKPENKDKLTKVLTAHVVAGKISGA
HHHHHHHHCCCCCEEEECCCCCCEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHH
EMMKQAKAMGGKYEMKTVSGDTLTAEVKKGKLYIMDESGGEAKVTIADVNQSNGVIHVVN
HHHHHHHHCCCCEEEEEECCCEEEEEEECCEEEEEECCCCCEEEEEEECCCCCCEEEEEH
KVLLPK
HHHCCC
>Mature Secondary Structure
MRLPSFRIIAISALVTGVAIATPAYAKNPVVGGAPMYTTKNIVENAVNSKDHTTLVAAVK
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
AAALVDTLQGAGPFTVFAPTNEAFAALPAGTVDTLLKPENKDKLTKVLTAHVVAGKISGA
HHHHHHHHCCCCCEEEECCCCCCEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHH
EMMKQAKAMGGKYEMKTVSGDTLTAEVKKGKLYIMDESGGEAKVTIADVNQSNGVIHVVN
HHHHHHHHCCCCEEEEEECCCEEEEEEECCEEEEEECCCCCEEEEEEECCCCCCEEEEEH
KVLLPK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]