| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is artJ [H]
Identifier: 13474012
GI number: 13474012
Start: 3809636
End: 3810409
Strand: Direct
Name: artJ [H]
Synonym: mlr4789
Alternate gene names: 13474012
Gene position: 3809636-3810409 (Clockwise)
Preceding gene: 13474011
Following gene: 13474013
Centisome position: 54.14
GC content: 61.63
Gene sequence:
>774_bases ATGCGTCTTTTCGGTCGTTTCGTGCTTGCCGCTTCCGTCGCCCTCACGCTTGCCAGCGGTGCCGCCAGCGCCCAGGACAA GCTCAGGATCGGTACCGAGGGCGCCTATCCGCCCTTCAACTACGCCAATGCCGACGGCACGCTGGGCGGCTTCGACATCG ACCTCGGCAAGGCGCTGTGCGCTGAGATGAAGGCCGAATGCGAATTCACAGTTCAGGATTTCGACGGCTCTATTCCTGCA CTGCAGGCTGGCAAGTTCGATGCGATCATCAACATCACCATCACGCCGGAGCGGGCCGAGAAGGTCGAGTTCACCCATAA ATACTACCAGACGCCGCCGGCCATCACGGTGCCGAAGGACTCGACCATCGCCGGCACCTCGCCGGACGACCTGAAAGGCA AGGCGCTCGGCGTGCAGACCGCGACCATCCACCAGAAATTCGCCGAGCAGAAATACTCAGGCTCGACCGTCAAGGCCTAT CCGACCGGCGACGACGCCCGCACCGACATGGCCAATGGCCGCCTCGATGCGATGATGGACGGCTCGATCATCCTGACCGA ATGGCTGAAGAAGCCCGATGGCGCCTGCTGCAAGCTGCTCGGCACGCTGACGGCCGATCCGGCCATTCACGGACCCGGCG TCGGTATCGCCCTGCAGAAGGGCAACAAGGAACTGGCCGGCAAGTTCAATGCGGCGATCGACGCCTTGCGCGCCAACGGC AAATACAAGGAAATTAACGACAAGTACTTTTCCTTCGACGTCTACGGCAACTGA
Upstream 100 bases:
>100_bases GATCGCTCACGGCGCCGTGATCGCCGCAGCACATGTCGCTTCCGTCTCCGCCGAAAGCACCAAAGCCCGTAGACTTCCCC AGTCAACGGAGATCTGGAAC
Downstream 100 bases:
>100_bases GACCGTTGGAAATTCTACTCTGGCGGCCATCTGAAGGCGGTTTCTGCGCTTCCCCGTTCTACTGCGTGCAGTAGAACTGA GCTCACGGACCTGAATGTCC
Product: amino acid ABC transporter, periplasmic amino acid-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MRLFGRFVLAASVALTLASGAASAQDKLRIGTEGAYPPFNYANADGTLGGFDIDLGKALCAEMKAECEFTVQDFDGSIPA LQAGKFDAIINITITPERAEKVEFTHKYYQTPPAITVPKDSTIAGTSPDDLKGKALGVQTATIHQKFAEQKYSGSTVKAY PTGDDARTDMANGRLDAMMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKELAGKFNAAIDALRANG KYKEINDKYFSFDVYGN
Sequences:
>Translated_257_residues MRLFGRFVLAASVALTLASGAASAQDKLRIGTEGAYPPFNYANADGTLGGFDIDLGKALCAEMKAECEFTVQDFDGSIPA LQAGKFDAIINITITPERAEKVEFTHKYYQTPPAITVPKDSTIAGTSPDDLKGKALGVQTATIHQKFAEQKYSGSTVKAY PTGDDARTDMANGRLDAMMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKELAGKFNAAIDALRANG KYKEINDKYFSFDVYGN >Mature_257_residues MRLFGRFVLAASVALTLASGAASAQDKLRIGTEGAYPPFNYANADGTLGGFDIDLGKALCAEMKAECEFTVQDFDGSIPA LQAGKFDAIINITITPERAEKVEFTHKYYQTPPAITVPKDSTIAGTSPDDLKGKALGVQTATIHQKFAEQKYSGSTVKAY PTGDDARTDMANGRLDAMMDGSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKELAGKFNAAIDALRANG KYKEINDKYFSFDVYGN
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=251, Percent_Identity=39.4422310756972, Blast_Score=173, Evalue=9e-45, Organism=Escherichia coli, GI1787088, Length=234, Percent_Identity=38.8888888888889, Blast_Score=167, Evalue=5e-43, Organism=Escherichia coli, GI1788649, Length=257, Percent_Identity=36.9649805447471, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=37.3390557939914, Blast_Score=154, Evalue=6e-39, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=31.5573770491803, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1788228, Length=228, Percent_Identity=28.9473684210526, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27372; Mature: 27372
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFGRFVLAASVALTLASGAASAQDKLRIGTEGAYPPFNYANADGTLGGFDIDLGKALC CCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHH AEMKAECEFTVQDFDGSIPALQAGKFDAIINITITPERAEKVEFTHKYYQTPPAITVPKD HHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCEECCCC STIAGTSPDDLKGKALGVQTATIHQKFAEQKYSGSTVKAYPTGDDARTDMANGRLDAMMD CEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCEEEEEC GSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKELAGKFNAAIDALRANG CCEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC KYKEINDKYFSFDVYGN CEEECCCEEEEEEECCC >Mature Secondary Structure MRLFGRFVLAASVALTLASGAASAQDKLRIGTEGAYPPFNYANADGTLGGFDIDLGKALC CCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHH AEMKAECEFTVQDFDGSIPALQAGKFDAIINITITPERAEKVEFTHKYYQTPPAITVPKD HHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCEECCCC STIAGTSPDDLKGKALGVQTATIHQKFAEQKYSGSTVKAYPTGDDARTDMANGRLDAMMD CEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCEEEEEC GSIILTEWLKKPDGACCKLLGTLTADPAIHGPGVGIALQKGNKELAGKFNAAIDALRANG CCEEEEHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCC KYKEINDKYFSFDVYGN CEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]