| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474011
Identifier: 13474011
GI number: 13474011
Start: 3807770
End: 3809512
Strand: Direct
Name: 13474011
Synonym: mlr4788
Alternate gene names: NA
Gene position: 3807770-3809512 (Clockwise)
Preceding gene: 13474010
Following gene: 13474012
Centisome position: 54.12
GC content: 65.75
Gene sequence:
>1743_bases ATGGCAAAGCTCGACGCCATCACGCTTTCGGTCCTCCAGGCGGCCTTGCAGCAGGTCTGCGATGAGATGGACCTGACCTT CTCCCGCGCCGCCTTCTCGCCGGTCATCGCCGAAGCCAACGACCGCTCCGACGGCATCTATTCAGCTGTCGACGGCTCGC TGATCGCACAGGGAAGCCAAGGCCTGCCGGTGTTCGTCGGCGTCATGCAATATTCGACGAAAACGGTGATCGAGATGATC GCCGACGGCCGTTGCCTGGCCCCTGAGCCGGGCGACATATACATCGTCAACGACCCCTATCTTGGCGGCACGCATCTGAT GGATGTGCGCTTCGCCATGCCGGTCTACCGGGCGGGAAAGATCTTCTGCTGGCTGTCCAACACCGGCCACTGGCCCGATA TTGGCGGCTCGGTGCCGGGTGGTTTCTCGGCCTCCGCCACCGCGGTCGAGCAGGAAGGCCTGCGGCTGCCGCCGGTGAAA CTCTTCAAGAAGGGCGTGCTCGATCCCGAGATCTACGCCATCATCTGCTCCAACATCCGCGTCGCCGACCAGCGCATCGG CGATATCAGGGCCCAGGCCGCCGCACTGCTGATCGGCCAGGATCGGCTCAATGGAATCCTGGATCGTTACGGTGACGAAA CTGTTGTCGAAGCAATCGCCGAACTGCGCCGCCGCGCCGCCGAGCAGATGCGCGCCAACATAGCGGCTATTCCCGACGGC ACCTATCATTCGAAGGCCTTTGTCGATTCCGATGGGGTGGTCAACGAGCCGCTGACCATCGCGCTAGCGGTGGAGAAACA AGGCGACACGCTGACCTTCGATTTCGCCGGCTCATCCAAGCCTTGCGCCGGGCCGATGAACAGCGTGCTGGCGACGACCC TGTCCTCGGTCTATCTCGCCATGCGTCATATCTTTCCGGATGTGCCGATCAGCGCCGGCGCCTTCGAGCCGTTGATCGTC AGGCGGCCGGAAGGCACCTTCCTCGACGCCAAATACCCGCGTCCCGTGTCGGGCTGCGCGGCGGAAGTCTCGCAGCGCAT CGCCGAGGCGGTGTTCGCGGCCATGGTGCAGGCATTGCCGGACAAGGTGACGGCGGCGCCCGCCGGCTCCAGCGGCAATT TCGCGCTCGGCGGCAACGACCCGGCGCGCGGCCGCGATTACGTCATGTACCAGATCTCCGGTGGCGGCTATGGCGGCAAT TCAGGCCATGACGGGCTGACCAATGGTTGCTCGACCATCGGCATTTCCAAGTCGCCGCCGGTCGAGATCATGGAGCAGGC CTTTCCGGTGCTCTATCGCCACTATGCGTTGCGCGAAGGCTCGGGCGGCGCCGGCAAGCATCGCGGCGGTTTCGGCCTCG CCTATGAGGTCGAGATCCTGCGCGGCGATGCGCGGGCCTCCTTCGTCATGGATCACGGCCGTTTCGGCCCGCAAGGCGCG CTCGGCGGCAAGGATGGCGAACCCAACAGCGTGACCGTCTTCCGCGGCGGGGTGGCGCATGTGCCGCCGCATCTGTCCAA GGAACAGGACATCCCGCTGAAGGCCGGCGACCGCGTGCGCGTTGGCACGCCGGGCGGCGGCGGCTATGGCGACCCGCGCG AGCGCGACGCCGATCAGGTGCAGCGCGACGTGGCGCTGGGATACTACACCGCAGAGGAAGCCAGCGAGAAGTTTGGCGTG GTCCTGTCGGCGGACGGTCTCACCGTTGACCGGAAGGCGACGGACGGGCAGCGCGCCGGCTAA
Upstream 100 bases:
>100_bases GACGCCACCACCGTGCTCGAACCCGGCGACCGCGCCCGGTCGGATGCCGACGGCAACATCATCATCGACATTGGCGAGGC CTGATATGCCTGACATTGAT
Downstream 100 bases:
>100_bases ACACCGCCCCTTGCCACAATGTGGATCGCTCACGGCGCCGTGATCGCCGCAGCACATGTCGCTTCCGTCTCCGCCGAAAG CACCAAAGCCCGTAGACTTC
Product: N-methylhydantoinase B
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 579
Protein sequence:
>580_residues MAKLDAITLSVLQAALQQVCDEMDLTFSRAAFSPVIAEANDRSDGIYSAVDGSLIAQGSQGLPVFVGVMQYSTKTVIEMI ADGRCLAPEPGDIYIVNDPYLGGTHLMDVRFAMPVYRAGKIFCWLSNTGHWPDIGGSVPGGFSASATAVEQEGLRLPPVK LFKKGVLDPEIYAIICSNIRVADQRIGDIRAQAAALLIGQDRLNGILDRYGDETVVEAIAELRRRAAEQMRANIAAIPDG TYHSKAFVDSDGVVNEPLTIALAVEKQGDTLTFDFAGSSKPCAGPMNSVLATTLSSVYLAMRHIFPDVPISAGAFEPLIV RRPEGTFLDAKYPRPVSGCAAEVSQRIAEAVFAAMVQALPDKVTAAPAGSSGNFALGGNDPARGRDYVMYQISGGGYGGN SGHDGLTNGCSTIGISKSPPVEIMEQAFPVLYRHYALREGSGGAGKHRGGFGLAYEVEILRGDARASFVMDHGRFGPQGA LGGKDGEPNSVTVFRGGVAHVPPHLSKEQDIPLKAGDRVRVGTPGGGGYGDPRERDADQVQRDVALGYYTAEEASEKFGV VLSADGLTVDRKATDGQRAG
Sequences:
>Translated_580_residues MAKLDAITLSVLQAALQQVCDEMDLTFSRAAFSPVIAEANDRSDGIYSAVDGSLIAQGSQGLPVFVGVMQYSTKTVIEMI ADGRCLAPEPGDIYIVNDPYLGGTHLMDVRFAMPVYRAGKIFCWLSNTGHWPDIGGSVPGGFSASATAVEQEGLRLPPVK LFKKGVLDPEIYAIICSNIRVADQRIGDIRAQAAALLIGQDRLNGILDRYGDETVVEAIAELRRRAAEQMRANIAAIPDG TYHSKAFVDSDGVVNEPLTIALAVEKQGDTLTFDFAGSSKPCAGPMNSVLATTLSSVYLAMRHIFPDVPISAGAFEPLIV RRPEGTFLDAKYPRPVSGCAAEVSQRIAEAVFAAMVQALPDKVTAAPAGSSGNFALGGNDPARGRDYVMYQISGGGYGGN SGHDGLTNGCSTIGISKSPPVEIMEQAFPVLYRHYALREGSGGAGKHRGGFGLAYEVEILRGDARASFVMDHGRFGPQGA LGGKDGEPNSVTVFRGGVAHVPPHLSKEQDIPLKAGDRVRVGTPGGGGYGDPRERDADQVQRDVALGYYTAEEASEKFGV VLSADGLTVDRKATDGQRAG >Mature_579_residues AKLDAITLSVLQAALQQVCDEMDLTFSRAAFSPVIAEANDRSDGIYSAVDGSLIAQGSQGLPVFVGVMQYSTKTVIEMIA DGRCLAPEPGDIYIVNDPYLGGTHLMDVRFAMPVYRAGKIFCWLSNTGHWPDIGGSVPGGFSASATAVEQEGLRLPPVKL FKKGVLDPEIYAIICSNIRVADQRIGDIRAQAAALLIGQDRLNGILDRYGDETVVEAIAELRRRAAEQMRANIAAIPDGT YHSKAFVDSDGVVNEPLTIALAVEKQGDTLTFDFAGSSKPCAGPMNSVLATTLSSVYLAMRHIFPDVPISAGAFEPLIVR RPEGTFLDAKYPRPVSGCAAEVSQRIAEAVFAAMVQALPDKVTAAPAGSSGNFALGGNDPARGRDYVMYQISGGGYGGNS GHDGLTNGCSTIGISKSPPVEIMEQAFPVLYRHYALREGSGGAGKHRGGFGLAYEVEILRGDARASFVMDHGRFGPQGAL GGKDGEPNSVTVFRGGVAHVPPHLSKEQDIPLKAGDRVRVGTPGGGGYGDPRERDADQVQRDVALGYYTAEEASEKFGVV LSADGLTVDRKATDGQRAG
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=564, Percent_Identity=27.4822695035461, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI133901900, Length=554, Percent_Identity=29.2418772563177, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI133901902, Length=533, Percent_Identity=29.4559099437148, Blast_Score=179, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6322634, Length=556, Percent_Identity=25.3597122302158, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI45550492, Length=591, Percent_Identity=25.7191201353638, Blast_Score=146, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 61270; Mature: 61139
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLDAITLSVLQAALQQVCDEMDLTFSRAAFSPVIAEANDRSDGIYSAVDGSLIAQGSQ CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCCCEECCCCCEEECCCC GLPVFVGVMQYSTKTVIEMIADGRCLAPEPGDIYIVNDPYLGGTHLMDVRFAMPVYRAGK CCEEEEHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCEEEEEHHHCCCCCCCE IFCWLSNTGHWPDIGGSVPGGFSASATAVEQEGLRLPPVKLFKKGVLDPEIYAIICSNIR EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCE VADQRIGDIRAQAAALLIGQDRLNGILDRYGDETVVEAIAELRRRAAEQMRANIAAIPDG EHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCC TYHSKAFVDSDGVVNEPLTIALAVEKQGDTLTFDFAGSSKPCAGPMNSVLATTLSSVYLA CCCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH MRHIFPDVPISAGAFEPLIVRRPEGTFLDAKYPRPVSGCAAEVSQRIAEAVFAAMVQALP HHHHCCCCCCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC DKVTAAPAGSSGNFALGGNDPARGRDYVMYQISGGGYGGNSGHDGLTNGCSTIGISKSPP CHHEECCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC VEIMEQAFPVLYRHYALREGSGGAGKHRGGFGLAYEVEILRGDARASFVMDHGRFGPQGA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCC LGGKDGEPNSVTVFRGGVAHVPPHLSKEQDIPLKAGDRVRVGTPGGGGYGDPRERDADQV CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH QRDVALGYYTAEEASEKFGVVLSADGLTVDRKATDGQRAG HHHHHHEEEEHHHHHCCCCEEEECCCEEEECCCCCCCCCC >Mature Secondary Structure AKLDAITLSVLQAALQQVCDEMDLTFSRAAFSPVIAEANDRSDGIYSAVDGSLIAQGSQ CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCCCCCCCCCCEECCCCCEEECCCC GLPVFVGVMQYSTKTVIEMIADGRCLAPEPGDIYIVNDPYLGGTHLMDVRFAMPVYRAGK CCEEEEHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCCCEEEEEHHHCCCCCCCE IFCWLSNTGHWPDIGGSVPGGFSASATAVEQEGLRLPPVKLFKKGVLDPEIYAIICSNIR EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCE VADQRIGDIRAQAAALLIGQDRLNGILDRYGDETVVEAIAELRRRAAEQMRANIAAIPDG EHHHHHHHHHHHHHHEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCC TYHSKAFVDSDGVVNEPLTIALAVEKQGDTLTFDFAGSSKPCAGPMNSVLATTLSSVYLA CCCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH MRHIFPDVPISAGAFEPLIVRRPEGTFLDAKYPRPVSGCAAEVSQRIAEAVFAAMVQALP HHHHCCCCCCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC DKVTAAPAGSSGNFALGGNDPARGRDYVMYQISGGGYGGNSGHDGLTNGCSTIGISKSPP CHHEECCCCCCCCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC VEIMEQAFPVLYRHYALREGSGGAGKHRGGFGLAYEVEILRGDARASFVMDHGRFGPQGA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCC LGGKDGEPNSVTVFRGGVAHVPPHLSKEQDIPLKAGDRVRVGTPGGGGYGDPRERDADQV CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHH QRDVALGYYTAEEASEKFGVVLSADGLTVDRKATDGQRAG HHHHHHEEEEHHHHHCCCCEEEECCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]