| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yieF [H]
Identifier: 13473983
GI number: 13473983
Start: 3769929
End: 3770525
Strand: Reverse
Name: yieF [H]
Synonym: mll4752
Alternate gene names: 13473983
Gene position: 3770525-3769929 (Counterclockwise)
Preceding gene: 13473984
Following gene: 13473982
Centisome position: 53.59
GC content: 62.65
Gene sequence:
>597_bases ATGGCAGTGATCCCGAAAATCCTCGTCTTTGCCGGCTCGGTGCGCAGCGGCGCCTATAGCGGCAGGACCGCCGATGTGGC GCAGAAGGAACTTGCGGTGCAAGGCGCCGAGGTGACCCGCATTTCGCTCGCCGACTATCCCTTGCCGATCCTCGACGAGG ATCTCGAGAAGGAAAAGGGTGTCCCGGAAAACGCCGTCAAACTCGGCCGTCTGATTTCAACCCATGACGGCCTGCTGATC GCCACGCCCGAATATAACGGCTCGATCCCGCCGCTGCTCAAGAACACGATCGACTGGGTGAGCCGGGTGCGCCGGGATGG CGGCCGATCGGTCAGGCCGCTTGCCGGCAAGGTCGCCGGGCTGTGCTCGTCCTCCAACGGCCATTTTGCCGGCATACGCT GCATCAACCATCTGCGCGCCGTGCTGGTACGCTGCCAGATGGAGGTGGTGACACCGGAATGTTCGGTGCCGGACGGCGGC GCCGCCTTCGACGAAGGCGGCAATTTCCGTGACGAAAGACTATACAAATCGATGGAGCATTTATGCCGCACGCTGATCGA AACCTCGCGCATGCTGTCGACCCGGATCGAGGCGTGA
Upstream 100 bases:
>100_bases GACTGTGCCCCCTACCCTACTGCCTTACTCCCCTATTCACCGACCCAGCCGTTGATTTGAGCCGCCTCTGGCTGTACCTG TCCGGGAACAAGGGTGGCCA
Downstream 100 bases:
>100_bases CCGCCGCGACCATGCAGGCCAAATCCATCCAGGCCCAGTCCATCCAGGAAAGACTGATCGTCGGCCTCGACCTACCGACC GTGCGGGAAGCCGAGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAVIPKILVFAGSVRSGAYSGRTADVAQKELAVQGAEVTRISLADYPLPILDEDLEKEKGVPENAVKLGRLISTHDGLLI ATPEYNGSIPPLLKNTIDWVSRVRRDGGRSVRPLAGKVAGLCSSSNGHFAGIRCINHLRAVLVRCQMEVVTPECSVPDGG AAFDEGGNFRDERLYKSMEHLCRTLIETSRMLSTRIEA
Sequences:
>Translated_198_residues MAVIPKILVFAGSVRSGAYSGRTADVAQKELAVQGAEVTRISLADYPLPILDEDLEKEKGVPENAVKLGRLISTHDGLLI ATPEYNGSIPPLLKNTIDWVSRVRRDGGRSVRPLAGKVAGLCSSSNGHFAGIRCINHLRAVLVRCQMEVVTPECSVPDGG AAFDEGGNFRDERLYKSMEHLCRTLIETSRMLSTRIEA >Mature_197_residues AVIPKILVFAGSVRSGAYSGRTADVAQKELAVQGAEVTRISLADYPLPILDEDLEKEKGVPENAVKLGRLISTHDGLLIA TPEYNGSIPPLLKNTIDWVSRVRRDGGRSVRPLAGKVAGLCSSSNGHFAGIRCINHLRAVLVRCQMEVVTPECSVPDGGA AFDEGGNFRDERLYKSMEHLCRTLIETSRMLSTRIEA
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=139, Percent_Identity=39.568345323741, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 21472; Mature: 21341
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIPKILVFAGSVRSGAYSGRTADVAQKELAVQGAEVTRISLADYPLPILDEDLEKEKG CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCC VPENAVKLGRLISTHDGLLIATPEYNGSIPPLLKNTIDWVSRVRRDGGRSVRPLAGKVAG CCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LCSSSNGHFAGIRCINHLRAVLVRCQMEVVTPECSVPDGGAAFDEGGNFRDERLYKSMEH HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LCRTLIETSRMLSTRIEA HHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVIPKILVFAGSVRSGAYSGRTADVAQKELAVQGAEVTRISLADYPLPILDEDLEKEKG CCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCC VPENAVKLGRLISTHDGLLIATPEYNGSIPPLLKNTIDWVSRVRRDGGRSVRPLAGKVAG CCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LCSSSNGHFAGIRCINHLRAVLVRCQMEVVTPECSVPDGGAAFDEGGNFRDERLYKSMEH HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LCRTLIETSRMLSTRIEA HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]