| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473971
Identifier: 13473971
GI number: 13473971
Start: 3758766
End: 3759173
Strand: Direct
Name: 13473971
Synonym: mlr4738
Alternate gene names: NA
Gene position: 3758766-3759173 (Clockwise)
Preceding gene: 13473970
Following gene: 13473972
Centisome position: 53.42
GC content: 62.75
Gene sequence:
>408_bases ATGAGCCGGCTTCTGCGAAAATTCGCCGCCATACGGCTTGTCCGGTTTGTCGTCGTCGGCATTGGCGCGGCGCTGCTGCT TTTCGTACTGTCATGGGCCTTGGTGTCGGCCGGCTTGCCGCCGTTTGTCGGCAGCGCCATCGCCTATATGCTGGCCTTCG TCGTGGCCTATTCGGCACAGCGCGGCTGGACGTTCGAGGGACGACACGACCACGCCCATGCGTTGCCACGGTATCTCGTC ACCCAGCTGGTCTGCGCAGCGTTTGCAGGCCTGTCGGCCCATGTCGCGGTGTCGATATTTTCCGCCTCGCCGCTGATCAT GTCAGCCATCATCACCGTCGCCGCAAGCGCCGCGAGCTATGTGCTCTCATCGGTCTGGGTGTTTCGCGACGATCAAAGAG CCGCGTGA
Upstream 100 bases:
>100_bases TCTTTTCGGCATTCCTGCTCGGTGTCCTCGAGATCCCGGTCAAGCGGCTGAAGGCCGGCCAGCCCGGCGGATCAGGCGAA TTCGACGCGACTGCTGAAAA
Downstream 100 bases:
>100_bases AGCCAAGGTCCCAGATCGAGCTGCCTGTTCAGGGCGTTTTCGCAACATGGAATTGCTTTGTGCAGGGCCGATTTAAGGTT TGCGCAGTGAGTTCGCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSRLLRKFAAIRLVRFVVVGIGAALLLFVLSWALVSAGLPPFVGSAIAYMLAFVVAYSAQRGWTFEGRHDHAHALPRYLV TQLVCAAFAGLSAHVAVSIFSASPLIMSAIITVAASAASYVLSSVWVFRDDQRAA
Sequences:
>Translated_135_residues MSRLLRKFAAIRLVRFVVVGIGAALLLFVLSWALVSAGLPPFVGSAIAYMLAFVVAYSAQRGWTFEGRHDHAHALPRYLV TQLVCAAFAGLSAHVAVSIFSASPLIMSAIITVAASAASYVLSSVWVFRDDQRAA >Mature_134_residues SRLLRKFAAIRLVRFVVVGIGAALLLFVLSWALVSAGLPPFVGSAIAYMLAFVVAYSAQRGWTFEGRHDHAHALPRYLVT QLVCAAFAGLSAHVAVSIFSASPLIMSAIITVAASAASYVLSSVWVFRDDQRAA
Specific function: Unknown
COG id: COG2246
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14438; Mature: 14307
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLRKFAAIRLVRFVVVGIGAALLLFVLSWALVSAGLPPFVGSAIAYMLAFVVAYSAQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC RGWTFEGRHDHAHALPRYLVTQLVCAAFAGLSAHVAVSIFSASPLIMSAIITVAASAASY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VLSSVWVFRDDQRAA HHHHHHHHCCCCCCC >Mature Secondary Structure SRLLRKFAAIRLVRFVVVGIGAALLLFVLSWALVSAGLPPFVGSAIAYMLAFVVAYSAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC RGWTFEGRHDHAHALPRYLVTQLVCAAFAGLSAHVAVSIFSASPLIMSAIITVAASAASY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VLSSVWVFRDDQRAA HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA