| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473972
Identifier: 13473972
GI number: 13473972
Start: 3759310
End: 3761127
Strand: Direct
Name: 13473972
Synonym: mlr4739
Alternate gene names: NA
Gene position: 3759310-3761127 (Clockwise)
Preceding gene: 13473971
Following gene: 13473973
Centisome position: 53.43
GC content: 67.16
Gene sequence:
>1818_bases GTGACTCCTGCCGATACCATGATCTCCGCCGAGGCCACGCCACGTCCGTCACGGCACAACGACCTTGCGCTCGTGCTCGT CGCCACGCTGGTGATGGTTGCCGTCAGCGCTCTCAGCGGATTCCGCGACTTGACCGACGCCGGCGGCGACAATGACAATC TGCTGCGTCTGGTCGAGGTTCGCGACATGCTGGCCGGCCAGGGCTGGTTCGACCTGCATCAGTACCGGATGGGTCTTGAA GGCGGCTTCGTCATGCACTGGTCGCGGCTGGTCGACGCGCCGCTCGCCGCCATCATTCTGGCGGCCTCGGCTCTGACCGG CAGCGTGGCCAGGGCTGAGACCATCGCGGAGGTGCTCTGGCCGGCGCTGCTCTTCTTCCTCGCCTTGCTCTTCACCACCC GCGCGGCGCGCAGTTTCGCCGGCGCCGCAGCCGTGCTGCCGGCCGTCGTCATCGGCGCCGCGGCGCTGCACTTCATCGGC ATCTTTTCGCCCGGCTCGCTCGATCATCACAATGTCCAGCTGACGCTGACCATGGCCTGCCTCAGCCTGCTGCTCGATGC GCCCGTGCAGCGCTGGGCGGCGCTGTTCGCTGGCCTGTGCGCGGCGCTGATGCTGGCCGTCGGCATGGAAACAGCGCCCT ATGTCGCCACCATCGGCGCGTGCATCGCCCTGCTGTTTGTCGCCAACCCCGGCGGTGAGGGGCGGATCGCCAGGGATTTC GGCCTTGGCTTTGCCGGCGTTTCGGGGCTGGTCTTCGTCACCACCATCGCCCCATCGGCGTGGGGCCAGCCGCAGTGCGA TGCCTTCTCGACAGTGCAGTTCGTGGTGGCCGCGCTCGCCGGATGCGGCCTTGCCGCCATGGCTTCGCTCGACATGGCCA AGGCCACGGTCGGCCGGCGCCTCGTGGCGCTCGGCCTGCTTGGCGTGGTGCTTGCCGCTGTCGTGGTGTCGCTGTTCCCG CAATGCCTGGCGGCCCCCTATGCGAACCTCGATCCGCGCCTCAAGGAATTATGGCTCGATAACATCGAAGAGGCGCAGTC GCTGTACAAGCTTGTCATCTACAACCAGGTCGCGGTGGTGGAGCGTTTTGCCACGCCACTGCTGGCGATCATGCTGATGG CGCTTCACCTCGGTCGTGGCGGCTCGCGGCGGCAGGACAGCCTCGTTGGCGCGCTGCTGGTGGTGGCGTTCCTGGTCAGT GCCTGGCAAGTGCGCGGCTCGACCTTCTCCATTGCCTTGGCGGTGATCCCGCTTTGCGCCTGGATCGCCAAATGGCGGCA GCGGGCCGAAGCCAGCCCGTCGCGCGGCTCCGCACTCAGGGTGGTCGCGGCCTGGCTGGTCTCGGTCAACGCACTCTGGG CGTGCGCAGCCGTGGCTGCATCAAGCGCCTTCGAAACCGGTGCGGCCGTCAAGGCCGCCAGTGTCAATGGGACCTGCCAA GGCAAGACCGCGTTCGCAGCGCTCAGCCAGCTGCCGGACACCACCGTGCTCGCCATTTCCAATCTTGGCTCACCCATCCT GGCCTATTCCGGACATCGCGTGTTCGCCGGGCCGTATCATCGCAACGTCGCGGGAAACCTGCTTGCACTCGATACCTTCC TCGGATCGAATGCAGATGCCAGGAAGGTGGTCGAAAGCAACCATGTCGGGCTTGTGGCGCTCTGCCGCGGCAACGCGGAA ACCCGCCTGCTCGTTGCCAGGGCGCCGGACGGCTTTCTGGCCGGGCTGACGCACGGCAACGTACCGGACTGGCTGGAGCC CGTGGCGGAGACACGGGGCGCCCAGCTCGAGCTCTATCACGTCAAGCTCGGCGGCTGA
Upstream 100 bases:
>100_bases TTTTCGCAACATGGAATTGCTTTGTGCAGGGCCGATTTAAGGTTTGCGCAGTGAGTTCGCGATAGCTTCTCTCACCAAGA GAACGCCCAGAGGCCGTCCC
Downstream 100 bases:
>100_bases AAATCACCGCGAGAACAAAGGTTTGACACAAGGTTTAGCCGGCTTCCCAAAGGCTTCCGGCTTTCTGCCACGGCAAGATC GCTGGTGAAAACCGGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 605; Mature: 604
Protein sequence:
>605_residues MTPADTMISAEATPRPSRHNDLALVLVATLVMVAVSALSGFRDLTDAGGDNDNLLRLVEVRDMLAGQGWFDLHQYRMGLE GGFVMHWSRLVDAPLAAIILAASALTGSVARAETIAEVLWPALLFFLALLFTTRAARSFAGAAAVLPAVVIGAAALHFIG IFSPGSLDHHNVQLTLTMACLSLLLDAPVQRWAALFAGLCAALMLAVGMETAPYVATIGACIALLFVANPGGEGRIARDF GLGFAGVSGLVFVTTIAPSAWGQPQCDAFSTVQFVVAALAGCGLAAMASLDMAKATVGRRLVALGLLGVVLAAVVVSLFP QCLAAPYANLDPRLKELWLDNIEEAQSLYKLVIYNQVAVVERFATPLLAIMLMALHLGRGGSRRQDSLVGALLVVAFLVS AWQVRGSTFSIALAVIPLCAWIAKWRQRAEASPSRGSALRVVAAWLVSVNALWACAAVAASSAFETGAAVKAASVNGTCQ GKTAFAALSQLPDTTVLAISNLGSPILAYSGHRVFAGPYHRNVAGNLLALDTFLGSNADARKVVESNHVGLVALCRGNAE TRLLVARAPDGFLAGLTHGNVPDWLEPVAETRGAQLELYHVKLGG
Sequences:
>Translated_605_residues MTPADTMISAEATPRPSRHNDLALVLVATLVMVAVSALSGFRDLTDAGGDNDNLLRLVEVRDMLAGQGWFDLHQYRMGLE GGFVMHWSRLVDAPLAAIILAASALTGSVARAETIAEVLWPALLFFLALLFTTRAARSFAGAAAVLPAVVIGAAALHFIG IFSPGSLDHHNVQLTLTMACLSLLLDAPVQRWAALFAGLCAALMLAVGMETAPYVATIGACIALLFVANPGGEGRIARDF GLGFAGVSGLVFVTTIAPSAWGQPQCDAFSTVQFVVAALAGCGLAAMASLDMAKATVGRRLVALGLLGVVLAAVVVSLFP QCLAAPYANLDPRLKELWLDNIEEAQSLYKLVIYNQVAVVERFATPLLAIMLMALHLGRGGSRRQDSLVGALLVVAFLVS AWQVRGSTFSIALAVIPLCAWIAKWRQRAEASPSRGSALRVVAAWLVSVNALWACAAVAASSAFETGAAVKAASVNGTCQ GKTAFAALSQLPDTTVLAISNLGSPILAYSGHRVFAGPYHRNVAGNLLALDTFLGSNADARKVVESNHVGLVALCRGNAE TRLLVARAPDGFLAGLTHGNVPDWLEPVAETRGAQLELYHVKLGG >Mature_604_residues TPADTMISAEATPRPSRHNDLALVLVATLVMVAVSALSGFRDLTDAGGDNDNLLRLVEVRDMLAGQGWFDLHQYRMGLEG GFVMHWSRLVDAPLAAIILAASALTGSVARAETIAEVLWPALLFFLALLFTTRAARSFAGAAAVLPAVVIGAAALHFIGI FSPGSLDHHNVQLTLTMACLSLLLDAPVQRWAALFAGLCAALMLAVGMETAPYVATIGACIALLFVANPGGEGRIARDFG LGFAGVSGLVFVTTIAPSAWGQPQCDAFSTVQFVVAALAGCGLAAMASLDMAKATVGRRLVALGLLGVVLAAVVVSLFPQ CLAAPYANLDPRLKELWLDNIEEAQSLYKLVIYNQVAVVERFATPLLAIMLMALHLGRGGSRRQDSLVGALLVVAFLVSA WQVRGSTFSIALAVIPLCAWIAKWRQRAEASPSRGSALRVVAAWLVSVNALWACAAVAASSAFETGAAVKAASVNGTCQG KTAFAALSQLPDTTVLAISNLGSPILAYSGHRVFAGPYHRNVAGNLLALDTFLGSNADARKVVESNHVGLVALCRGNAET RLLVARAPDGFLAGLTHGNVPDWLEPVAETRGAQLELYHVKLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63270; Mature: 63139
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPADTMISAEATPRPSRHNDLALVLVATLVMVAVSALSGFRDLTDAGGDNDNLLRLVEV CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RDMLAGQGWFDLHQYRMGLEGGFVMHWSRLVDAPLAAIILAASALTGSVARAETIAEVLW HHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALLFFLALLFTTRAARSFAGAAAVLPAVVIGAAALHFIGIFSPGSLDHHNVQLTLTMAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHH LSLLLDAPVQRWAALFAGLCAALMLAVGMETAPYVATIGACIALLFVANPGGEGRIARDF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHH GLGFAGVSGLVFVTTIAPSAWGQPQCDAFSTVQFVVAALAGCGLAAMASLDMAKATVGRR CCCHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LVALGLLGVVLAAVVVSLFPQCLAAPYANLDPRLKELWLDNIEEAQSLYKLVIYNQVAVV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ERFATPLLAIMLMALHLGRGGSRRQDSLVGALLVVAFLVSAWQVRGSTFSIALAVIPLCA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WIAKWRQRAEASPSRGSALRVVAAWLVSVNALWACAAVAASSAFETGAAVKAASVNGTCQ HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC GKTAFAALSQLPDTTVLAISNLGSPILAYSGHRVFAGPYHRNVAGNLLALDTFLGSNADA CHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEECCCCCCCCCCCEEEHHHHCCCCHH RKVVESNHVGLVALCRGNAETRLLVARAPDGFLAGLTHGNVPDWLEPVAETRGAQLELYH HHHHHCCCCCEEEEECCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHCCCCEEEEEE VKLGG EEECC >Mature Secondary Structure TPADTMISAEATPRPSRHNDLALVLVATLVMVAVSALSGFRDLTDAGGDNDNLLRLVEV CCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH RDMLAGQGWFDLHQYRMGLEGGFVMHWSRLVDAPLAAIILAASALTGSVARAETIAEVLW HHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALLFFLALLFTTRAARSFAGAAAVLPAVVIGAAALHFIGIFSPGSLDHHNVQLTLTMAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHH LSLLLDAPVQRWAALFAGLCAALMLAVGMETAPYVATIGACIALLFVANPGGEGRIARDF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHH GLGFAGVSGLVFVTTIAPSAWGQPQCDAFSTVQFVVAALAGCGLAAMASLDMAKATVGRR CCCHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LVALGLLGVVLAAVVVSLFPQCLAAPYANLDPRLKELWLDNIEEAQSLYKLVIYNQVAVV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ERFATPLLAIMLMALHLGRGGSRRQDSLVGALLVVAFLVSAWQVRGSTFSIALAVIPLCA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH WIAKWRQRAEASPSRGSALRVVAAWLVSVNALWACAAVAASSAFETGAAVKAASVNGTCQ HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC GKTAFAALSQLPDTTVLAISNLGSPILAYSGHRVFAGPYHRNVAGNLLALDTFLGSNADA CHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEECCCCCCCCCCCEEEHHHHCCCCHH RKVVESNHVGLVALCRGNAETRLLVARAPDGFLAGLTHGNVPDWLEPVAETRGAQLELYH HHHHHCCCCCEEEEECCCCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHCCCCEEEEEE VKLGG EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA