| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yieF [H]
Identifier: 13473949
GI number: 13473949
Start: 3739368
End: 3739937
Strand: Reverse
Name: yieF [H]
Synonym: mll4710
Alternate gene names: 13473949
Gene position: 3739937-3739368 (Counterclockwise)
Preceding gene: 13473951
Following gene: 13473948
Centisome position: 53.15
GC content: 53.51
Gene sequence:
>570_bases ATGTGGGAGTATTCCTATGGCCCGAACAAAGTCGGCTATCTGATCGGCAGCCTCGCGAAAGATTCAATCAACCGCAAGCT CGCAAAAGCACTGGTGCAACTGGCACCTCCAGAGCTTGAAATGTCGGAGATTTCCTTCAAGGATTTGCCGCTCTATAGCT ATGATTACGACGTTGACTTTCCGCCGGTCGCACGTGCCTTCAAGGATGCCATCGCGTCAGTCGAGGCCGTTCTATTCGTT ACGCCAGAGTACAATCGCTCGATTCCAGGAGGGTTGAAGAACGCAATTGACTGGGCAAGCCGCCCCTACGGCAAAAATTC TTTTGCTCGCAAACCGTCGGCCGTCATAGGGACATCCCCTGGAACCATCGGGACCGCCGTAGCCCAGCAGAGCCTGCGCA GCGTGCTCAGCTTCTGCAACTCGCCGCAGATGAATGCTCCGGAAGCTTACATTCAATTTACGCCCGGCCTAATCACGGAT AGGGGCGAAGTAACTGTGGAATCCACCGAGCAGTTTTTGCGAAATTACATGGATGATACGGTCCTTCAGGTCGTGCACCA AAATTCCTGA
Upstream 100 bases:
>100_bases GTTTGTGCTGATCAGCTGATACCGACCGGCCCAAGACTTGCCGAAAGAGGCTGGCGCCCGGCCTTCGATAAGCAGATACT ACCCTTGGGCGTCGGCGGCA
Downstream 100 bases:
>100_bases TGCCGCCACGAAGTAGCTTAATCGCGGCCAGGTCACTCGCCTGAAGTAAGTCATTTCGAATAACCAAGCCATCGGCCTCT GCCCACTGGGTATGGACGCA
Product: putative oxidoreductase, (NADPH:quinone oxidoreductase)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MWEYSYGPNKVGYLIGSLAKDSINRKLAKALVQLAPPELEMSEISFKDLPLYSYDYDVDFPPVARAFKDAIASVEAVLFV TPEYNRSIPGGLKNAIDWASRPYGKNSFARKPSAVIGTSPGTIGTAVAQQSLRSVLSFCNSPQMNAPEAYIQFTPGLITD RGEVTVESTEQFLRNYMDDTVLQVVHQNS
Sequences:
>Translated_189_residues MWEYSYGPNKVGYLIGSLAKDSINRKLAKALVQLAPPELEMSEISFKDLPLYSYDYDVDFPPVARAFKDAIASVEAVLFV TPEYNRSIPGGLKNAIDWASRPYGKNSFARKPSAVIGTSPGTIGTAVAQQSLRSVLSFCNSPQMNAPEAYIQFTPGLITD RGEVTVESTEQFLRNYMDDTVLQVVHQNS >Mature_189_residues MWEYSYGPNKVGYLIGSLAKDSINRKLAKALVQLAPPELEMSEISFKDLPLYSYDYDVDFPPVARAFKDAIASVEAVLFV TPEYNRSIPGGLKNAIDWASRPYGKNSFARKPSAVIGTSPGTIGTAVAQQSLRSVLSFCNSPQMNAPEAYIQFTPGLITD RGEVTVESTEQFLRNYMDDTVLQVVHQNS
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=176, Percent_Identity=38.6363636363636, Blast_Score=106, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20851; Mature: 20851
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEYSYGPNKVGYLIGSLAKDSINRKLAKALVQLAPPELEMSEISFKDLPLYSYDYDVDF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCCCCCC PPVARAFKDAIASVEAVLFVTPEYNRSIPGGLKNAIDWASRPYGKNSFARKPSAVIGTSP CHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCC GTIGTAVAQQSLRSVLSFCNSPQMNAPEAYIQFTPGLITDRGEVTVESTEQFLRNYMDDT CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCEEHHHHHHHHHHHHHHH VLQVVHQNS HHHHHHCCC >Mature Secondary Structure MWEYSYGPNKVGYLIGSLAKDSINRKLAKALVQLAPPELEMSEISFKDLPLYSYDYDVDF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCEECCCCCCC PPVARAFKDAIASVEAVLFVTPEYNRSIPGGLKNAIDWASRPYGKNSFARKPSAVIGTSP CHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCC GTIGTAVAQQSLRSVLSFCNSPQMNAPEAYIQFTPGLITDRGEVTVESTEQFLRNYMDDT CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCEEHHHHHHHHHHHHHHH VLQVVHQNS HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]