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The map label for this gene is yhhT [H]

Identifier: 13473951

GI number: 13473951

Start: 3740956

End: 3742944

Strand: Reverse

Name: yhhT [H]

Synonym: mll4712

Alternate gene names: 13473951

Gene position: 3742944-3740956 (Counterclockwise)

Preceding gene: 13473953

Following gene: 13473949

Centisome position: 53.2

GC content: 63.6

Gene sequence:

>1989_bases
GTGGCAAACAGTCAACGAAATGGCATGAAACCAACGGGTGCTGGCCTGGCGGGTATACTTTCGGCTGCTAACGTCCACCC
GCGCACTGCACTGCCCACGGTCGGCACGATCGTTACGGCGGTGGTAGCGCTTTATTTCGGGCGAGAGGTTTTCCTGCCGA
TCGCCATTGCGTTGCTGTTGACCTTCGCGCTTGCCCCCCTTGTCTCGACGCTAAGGCGAGTGGGCATTCCTCGCATCATC
GCCGTCATCGGCAGCGTGTTTGGCGCCTTTGCGGCGCTCGGACTGTTCTCCTTCATTGTCGCGACACAGGTCAGCGTACT
GGCGCAGAATATCCCGGGCTATCAGACCAACATCTTGACCAAGATCCATTCGCTCAAGAAAACCGGAGGCGAGGGCGGGA
TCGTTGCCAGGCTGAGCCGGGTTATTGAGCGTGTCGGCCAGGAGATCGACCAGCAGGAGCCGCCGGCGCCTGCCGCCGAC
AAACCGCAGCGCGAGCCTGTGCCCGTTGAGGTCGTCGCCCGCGAACGGCCGCTTGAAGTCCTGCAGAGTTTGGTCGGTAC
CCTGATCAGCCCGCTGGCCTCTGCAGGACTGATCATCATCGTCGTCATCTTTATGCTGCTGGAACGGGAGGAGCTCCGCG
ATCGTTTCATTCGTCTCGTAGGCTACGGCGATCTCCACCGCACCACCCAGGCGCTGCAGGATGCCGGCAAACGGGTCGGT
CAGTATCTACTTATGCAATTGGTGGTGAACACGGTCTACGCCATCCCGATTGCCATCGGGCTCTGGATCCTCGGCATACC
CAATGCGCTGCTATGGGGAATGCTGGCGCTGGCGCTGCGCTTCGTTCCTTATATCGGCCCGGTGATCGGCGCGCTGCTGC
CGCTGTTCTTGGCGCTGGCCGTGGCGCCCGGCTGGTCGCTGGTGCTGTGGACTGCCGGCTTATTCGTGGTGATGGAACTG
GTCACCGGCAATGTCGTCGAGCCCTGGCTCTACGGCTCGCGCACCGGCCTGTCTCCGCTCGCCATCATTGTCGCGGCGAT
CTTCTGGACATGGCTGTGGGGACCGCTCGGCCTGGTCCTGTCTACGCCGCTCACCGTCTGTCTCGTCGTGCTCGGCCGCC
ACGTGCCGCAGTTCGAATTCCTCGACGTGTTGTTCGGCAACGAGCCGGTGCTCGAACCGCATGCCCGGCTCTACCAGCGA
CTGTTGGCCGGCGATCCCGACGAAGCCACTGACCATGCCGAGGAAATGCTGGAGGAAAAATATCTGGTCGAGTTCTACGA
CAAGGTCGCCATTCCCGCTTTGCTGCTCGGCGAGCAGGATCGCGTGCGCGGCGTCATGGACGACCAGCAAAGGCGACAGG
TGGCGGCCAGTGCGCTGACGCTGGTGGCCAACCTCGACGACAGTGCACAGAATGAGGCCGACGAGGACGACGATCCGGCC
GATGGCGCCAAGGCGGACGTGGCAAAAGAGGCGGCGGAAGAAAGCGAGGACGACACCGAACTGCCTGACGGCACCGGCAT
GTCGGTGCTGTGTGCCGGCGGCCGCGGCGAACTCGACGATGCTGCCGCCGCCATGCTGGCGCAAGTGCTCGAAGTGCAAG
GGGCGACAGCCGCAAAGGCGAGCTTTACCGACATGGAGCTGGCGAGCATTCGCGGCCTCGAACTGGGTGCCGTCGATACC
GTCGTGGTCGGCTTCCTCAACCGCGACTCGGTCAATCACGCCCGCTTTCTGGTGCGCCGGCTGAAGCGCGCCCGGCCGGC
GCTCAGGGTCGGCATCGTGTTCTGGTCGGAAACCGGCAACGACGACAAGGAGGCTGCCGCCAAACTGGCCGGCAACCTCA
ATGCCGATTTCGTCGCCAATGGCATGGCCGACGCGGCGCTTGGCGCGCTGTCCAACGACCCGCCGGTGGTGCTCAAGCTC
GCCACCAAGCGTCGCCTGCGCCGCCGGCCGTCTGACCGTCAGAAAATCTTGATTGCCATTCCCAGCTAA

Upstream 100 bases:

>100_bases
AGGGGAAGCCGCCCGAGAACGACACCGCAAGCAGCCTGGCGACGTCGATGGCTTTGGCACGATCGGCTTCGCGTCGATAC
TACCGCTAGGGGGACATTGA

Downstream 100 bases:

>100_bases
TTCGATTCATCGCGCGGCTCAGGCACAAAGCTTGAAACGGCGGACTATGAGCCGTGTCCTATGGATCAACCGTAAATTCG
ACCCACATGCCGGCTCCATA

Product: integral membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MANSQRNGMKPTGAGLAGILSAANVHPRTALPTVGTIVTAVVALYFGREVFLPIAIALLLTFALAPLVSTLRRVGIPRII
AVIGSVFGAFAALGLFSFIVATQVSVLAQNIPGYQTNILTKIHSLKKTGGEGGIVARLSRVIERVGQEIDQQEPPAPAAD
KPQREPVPVEVVARERPLEVLQSLVGTLISPLASAGLIIIVVIFMLLEREELRDRFIRLVGYGDLHRTTQALQDAGKRVG
QYLLMQLVVNTVYAIPIAIGLWILGIPNALLWGMLALALRFVPYIGPVIGALLPLFLALAVAPGWSLVLWTAGLFVVMEL
VTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQR
LLAGDPDEATDHAEEMLEEKYLVEFYDKVAIPALLLGEQDRVRGVMDDQQRRQVAASALTLVANLDDSAQNEADEDDDPA
DGAKADVAKEAAEESEDDTELPDGTGMSVLCAGGRGELDDAAAAMLAQVLEVQGATAAKASFTDMELASIRGLELGAVDT
VVVGFLNRDSVNHARFLVRRLKRARPALRVGIVFWSETGNDDKEAAAKLAGNLNADFVANGMADAALGALSNDPPVVLKL
ATKRRLRRRPSDRQKILIAIPS

Sequences:

>Translated_662_residues
MANSQRNGMKPTGAGLAGILSAANVHPRTALPTVGTIVTAVVALYFGREVFLPIAIALLLTFALAPLVSTLRRVGIPRII
AVIGSVFGAFAALGLFSFIVATQVSVLAQNIPGYQTNILTKIHSLKKTGGEGGIVARLSRVIERVGQEIDQQEPPAPAAD
KPQREPVPVEVVARERPLEVLQSLVGTLISPLASAGLIIIVVIFMLLEREELRDRFIRLVGYGDLHRTTQALQDAGKRVG
QYLLMQLVVNTVYAIPIAIGLWILGIPNALLWGMLALALRFVPYIGPVIGALLPLFLALAVAPGWSLVLWTAGLFVVMEL
VTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQR
LLAGDPDEATDHAEEMLEEKYLVEFYDKVAIPALLLGEQDRVRGVMDDQQRRQVAASALTLVANLDDSAQNEADEDDDPA
DGAKADVAKEAAEESEDDTELPDGTGMSVLCAGGRGELDDAAAAMLAQVLEVQGATAAKASFTDMELASIRGLELGAVDT
VVVGFLNRDSVNHARFLVRRLKRARPALRVGIVFWSETGNDDKEAAAKLAGNLNADFVANGMADAALGALSNDPPVVLKL
ATKRRLRRRPSDRQKILIAIPS
>Mature_661_residues
ANSQRNGMKPTGAGLAGILSAANVHPRTALPTVGTIVTAVVALYFGREVFLPIAIALLLTFALAPLVSTLRRVGIPRIIA
VIGSVFGAFAALGLFSFIVATQVSVLAQNIPGYQTNILTKIHSLKKTGGEGGIVARLSRVIERVGQEIDQQEPPAPAADK
PQREPVPVEVVARERPLEVLQSLVGTLISPLASAGLIIIVVIFMLLEREELRDRFIRLVGYGDLHRTTQALQDAGKRVGQ
YLLMQLVVNTVYAIPIAIGLWILGIPNALLWGMLALALRFVPYIGPVIGALLPLFLALAVAPGWSLVLWTAGLFVVMELV
TGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQRL
LAGDPDEATDHAEEMLEEKYLVEFYDKVAIPALLLGEQDRVRGVMDDQQRRQVAASALTLVANLDDSAQNEADEDDDPAD
GAKADVAKEAAEESEDDTELPDGTGMSVLCAGGRGELDDAAAAMLAQVLEVQGATAAKASFTDMELASIRGLELGAVDTV
VVGFLNRDSVNHARFLVRRLKRARPALRVGIVFWSETGNDDKEAAAKLAGNLNADFVANGMADAALGALSNDPPVVLKLA
TKRRLRRRPSDRQKILIAIPS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=335, Percent_Identity=25.6716417910448, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1787885, Length=337, Percent_Identity=27.0029673590504, Blast_Score=90, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 71103; Mature: 70971

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00622 HTH_LUXR_1 ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSQRNGMKPTGAGLAGILSAANVHPRTALPTVGTIVTAVVALYFGREVFLPIAIALLL
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
TFALAPLVSTLRRVGIPRIIAVIGSVFGAFAALGLFSFIVATQVSVLAQNIPGYQTNILT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KIHSLKKTGGEGGIVARLSRVIERVGQEIDQQEPPAPAADKPQREPVPVEVVARERPLEV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHH
LQSLVGTLISPLASAGLIIIVVIFMLLEREELRDRFIRLVGYGDLHRTTQALQDAGKRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QYLLMQLVVNTVYAIPIAIGLWILGIPNALLWGMLALALRFVPYIGPVIGALLPLFLALA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAPGWSLVLWTAGLFVVMELVTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVL
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
STPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQRLLAGDPDEATDHAEEMLEEK
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
YLVEFYDKVAIPALLLGEQDRVRGVMDDQQRRQVAASALTLVANLDDSAQNEADEDDDPA
HHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCC
DGAKADVAKEAAEESEDDTELPDGTGMSVLCAGGRGELDDAAAAMLAQVLEVQGATAAKA
CCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHC
SFTDMELASIRGLELGAVDTVVVGFLNRDSVNHARFLVRRLKRARPALRVGIVFWSETGN
CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCC
DDKEAAAKLAGNLNADFVANGMADAALGALSNDPPVVLKLATKRRLRRRPSDRQKILIAI
CHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEE
PS
CC
>Mature Secondary Structure 
ANSQRNGMKPTGAGLAGILSAANVHPRTALPTVGTIVTAVVALYFGREVFLPIAIALLL
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
TFALAPLVSTLRRVGIPRIIAVIGSVFGAFAALGLFSFIVATQVSVLAQNIPGYQTNILT
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KIHSLKKTGGEGGIVARLSRVIERVGQEIDQQEPPAPAADKPQREPVPVEVVARERPLEV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHH
LQSLVGTLISPLASAGLIIIVVIFMLLEREELRDRFIRLVGYGDLHRTTQALQDAGKRVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QYLLMQLVVNTVYAIPIAIGLWILGIPNALLWGMLALALRFVPYIGPVIGALLPLFLALA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAPGWSLVLWTAGLFVVMELVTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVL
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
STPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQRLLAGDPDEATDHAEEMLEEK
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
YLVEFYDKVAIPALLLGEQDRVRGVMDDQQRRQVAASALTLVANLDDSAQNEADEDDDPA
HHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCC
DGAKADVAKEAAEESEDDTELPDGTGMSVLCAGGRGELDDAAAAMLAQVLEVQGATAAKA
CCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHC
SFTDMELASIRGLELGAVDTVVVGFLNRDSVNHARFLVRRLKRARPALRVGIVFWSETGN
CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCC
DDKEAAAKLAGNLNADFVANGMADAALGALSNDPPVVLKLATKRRLRRRPSDRQKILIAI
CHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEEE
PS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]