| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473920
Identifier: 13473920
GI number: 13473920
Start: 3708003
End: 3708581
Strand: Direct
Name: 13473920
Synonym: mlr4671
Alternate gene names: NA
Gene position: 3708003-3708581 (Clockwise)
Preceding gene: 13473919
Following gene: 13473921
Centisome position: 52.7
GC content: 58.89
Gene sequence:
>579_bases ATGGTTGAAACAAGTGGCCTCTGGGTCATGTCGGCATATCTGGTTGCCGGCTTGCTCGGTGCGTTCGTGCTTTATCTGGC ATCGTTGTTCCTTCGCAGAAAGTCTCCATCCACCCCTGTTGTGGGTCAACCGTCTGGTCAAGCAGCCTTTACGGCCGTGT CCCGCGACTCCTCGCGACTGACGAAGGTCAAGCTCGTGCCAAGCTACGGCTACCAACCTCTGGCAACGCTGGATCATGAT GTCGTGGAGGGGATTGAGCCGGACAGGCTGGTTTTGACGGCGAGGCTGAACGACGGCCTTGACGCGTGGCGCGACAATTA TGGTGAAATCGCACCCGAGGACCTGAACCTGTCGGCGGATCTTTGCCGGGCTCTCAACGACTGGAACTGGGACTATCAAA CCTTTTTCAACGAAATCGATCCCACCGACCCCCACTGCACGCCAGAACACGAAGCCGCACATGAGGCCGAGGGCCGCGAT CTGGCGCTACGCGTTCAACGTGAACGACCTGACTTGACCGTTTTCGTGGCGGAGCCCGGTGGCGATCTGGTCGAAATACG CGCACTCGGTCGGGGCTAA
Upstream 100 bases:
>100_bases TCTGCGTGGACGGAGAGAATTGTACGGGGATCTCTTGGGACATCAGCGTCGTCAACCACTGACGCGTTCGGATCGCGCGG TGAGATGTCGATGATGCCAA
Downstream 100 bases:
>100_bases CCGATGCGCGAGAAATCACCGGCTCTTACGTCTCATACCTTCAGGAGGAAATCCTATATGACCAGACCGTTCCACCGTCT CAGAGTCGTTGCGCTGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MVETSGLWVMSAYLVAGLLGAFVLYLASLFLRRKSPSTPVVGQPSGQAAFTAVSRDSSRLTKVKLVPSYGYQPLATLDHD VVEGIEPDRLVLTARLNDGLDAWRDNYGEIAPEDLNLSADLCRALNDWNWDYQTFFNEIDPTDPHCTPEHEAAHEAEGRD LALRVQRERPDLTVFVAEPGGDLVEIRALGRG
Sequences:
>Translated_192_residues MVETSGLWVMSAYLVAGLLGAFVLYLASLFLRRKSPSTPVVGQPSGQAAFTAVSRDSSRLTKVKLVPSYGYQPLATLDHD VVEGIEPDRLVLTARLNDGLDAWRDNYGEIAPEDLNLSADLCRALNDWNWDYQTFFNEIDPTDPHCTPEHEAAHEAEGRD LALRVQRERPDLTVFVAEPGGDLVEIRALGRG >Mature_192_residues MVETSGLWVMSAYLVAGLLGAFVLYLASLFLRRKSPSTPVVGQPSGQAAFTAVSRDSSRLTKVKLVPSYGYQPLATLDHD VVEGIEPDRLVLTARLNDGLDAWRDNYGEIAPEDLNLSADLCRALNDWNWDYQTFFNEIDPTDPHCTPEHEAAHEAEGRD LALRVQRERPDLTVFVAEPGGDLVEIRALGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21210; Mature: 21210
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVETSGLWVMSAYLVAGLLGAFVLYLASLFLRRKSPSTPVVGQPSGQAAFTAVSRDSSRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCE TKVKLVPSYGYQPLATLDHDVVEGIEPDRLVLTARLNDGLDAWRDNYGEIAPEDLNLSAD EEEEEECCCCCCCHHHCCHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCHH LCRALNDWNWDYQTFFNEIDPTDPHCTPEHEAAHEAEGRDLALRVQRERPDLTVFVAEPG HHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCEEEEEECCC GDLVEIRALGRG CCEEEEEEECCC >Mature Secondary Structure MVETSGLWVMSAYLVAGLLGAFVLYLASLFLRRKSPSTPVVGQPSGQAAFTAVSRDSSRL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCE TKVKLVPSYGYQPLATLDHDVVEGIEPDRLVLTARLNDGLDAWRDNYGEIAPEDLNLSAD EEEEEECCCCCCCHHHCCHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCCHH LCRALNDWNWDYQTFFNEIDPTDPHCTPEHEAAHEAEGRDLALRVQRERPDLTVFVAEPG HHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCEEEEEECCC GDLVEIRALGRG CCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA