| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473921
Identifier: 13473921
GI number: 13473921
Start: 3708585
End: 3709175
Strand: Direct
Name: 13473921
Synonym: mlr4672
Alternate gene names: NA
Gene position: 3708585-3709175 (Clockwise)
Preceding gene: 13473920
Following gene: 13473926
Centisome position: 52.71
GC content: 56.35
Gene sequence:
>591_bases ATGCGCGAGAAATCACCGGCTCTTACGTCTCATACCTTCAGGAGGAAATCCTATATGACCAGACCGTTCCACCGTCTCAG AGTCGTTGCGCTGGCCGCCGTTGTCGGCGGAAGCTTGGTGCAACTTGGCCCAGAGTCTGGCAAGGCCACCGCCGCGACAC CAGCTGCCACGCCCTACGGCTATGATGTGAAAATCAGTTTCAGCCCGGAGGCCGTCGAGAGAATGAAGAGCCTGCATCGA CAGGTCGCCCTTGCCAATACGTTTTACGGCGATGCGAGCCCGGAAGCGATCGCACGCCTCAAACTCAAGCCTTTCGCTCA GTTGGACATAGGTGTGGAAACCATTCCTGTCGGTATCGTCGACCAAACGGTCCATGTAACGGGCGCCCCGGTAACCACGA AGAAGCTGGCAGATACTGTCGACCAGAAACCGAGCGTTCTGGTCCAGATCTTTTCCGGATCAAATACGCCCGGGGCCAAC GACAATCAGCTGCATTGCGATCTGTTTCAGGATCAGATCACCCTTGCCCAGAGCCAGGCTGTCGATCTTCATTGTGAAGC TGTACCTGCGGATCTCGTCGGCAAAGAATAG
Upstream 100 bases:
>100_bases GGCGCTACGCGTTCAACGTGAACGACCTGACTTGACCGTTTTCGTGGCGGAGCCCGGTGGCGATCTGGTCGAAATACGCG CACTCGGTCGGGGCTAACCG
Downstream 100 bases:
>100_bases CCGTGAGCGGTGCCCGCGGCGCTACTCCTGTTGAAGGGCTCTGGCCCGCGAGAGCAACTCCAGCAGGGTTGGTCTCCAAC GAACCGAGGAGTACGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MREKSPALTSHTFRRKSYMTRPFHRLRVVALAAVVGGSLVQLGPESGKATAATPAATPYGYDVKISFSPEAVERMKSLHR QVALANTFYGDASPEAIARLKLKPFAQLDIGVETIPVGIVDQTVHVTGAPVTTKKLADTVDQKPSVLVQIFSGSNTPGAN DNQLHCDLFQDQITLAQSQAVDLHCEAVPADLVGKE
Sequences:
>Translated_196_residues MREKSPALTSHTFRRKSYMTRPFHRLRVVALAAVVGGSLVQLGPESGKATAATPAATPYGYDVKISFSPEAVERMKSLHR QVALANTFYGDASPEAIARLKLKPFAQLDIGVETIPVGIVDQTVHVTGAPVTTKKLADTVDQKPSVLVQIFSGSNTPGAN DNQLHCDLFQDQITLAQSQAVDLHCEAVPADLVGKE >Mature_196_residues MREKSPALTSHTFRRKSYMTRPFHRLRVVALAAVVGGSLVQLGPESGKATAATPAATPYGYDVKISFSPEAVERMKSLHR QVALANTFYGDASPEAIARLKLKPFAQLDIGVETIPVGIVDQTVHVTGAPVTTKKLADTVDQKPSVLVQIFSGSNTPGAN DNQLHCDLFQDQITLAQSQAVDLHCEAVPADLVGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21033; Mature: 21033
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREKSPALTSHTFRRKSYMTRPFHRLRVVALAAVVGGSLVQLGPESGKATAATPAATPYG CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCC YDVKISFSPEAVERMKSLHRQVALANTFYGDASPEAIARLKLKPFAQLDIGVETIPVGIV CEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCEEECCCCEEEEEEEE DQTVHVTGAPVTTKKLADTVDQKPSVLVQIFSGSNTPGANDNQLHCDLFQDQITLAQSQA CCEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCC VDLHCEAVPADLVGKE EEEEEEECCHHHCCCC >Mature Secondary Structure MREKSPALTSHTFRRKSYMTRPFHRLRVVALAAVVGGSLVQLGPESGKATAATPAATPYG CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCC YDVKISFSPEAVERMKSLHRQVALANTFYGDASPEAIARLKLKPFAQLDIGVETIPVGIV CEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCEEECCCCEEEEEEEE DQTVHVTGAPVTTKKLADTVDQKPSVLVQIFSGSNTPGANDNQLHCDLFQDQITLAQSQA CCEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCC VDLHCEAVPADLVGKE EEEEEEECCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA