| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yfbT [H]
Identifier: 13473481
GI number: 13473481
Start: 3275522
End: 3276187
Strand: Direct
Name: yfbT [H]
Synonym: mlr4094
Alternate gene names: 13473481
Gene position: 3275522-3276187 (Clockwise)
Preceding gene: 13473477
Following gene: 13473484
Centisome position: 46.55
GC content: 68.02
Gene sequence:
>666_bases ATGTTTGCTGGCAGAAAATTCGCGGCCTTCCTTTTCGACATGGACGGCACGCTGATCAATTCCATCGCCTCGGCGGAGCG GGTGTGGAGCGATTGGGCGCGCCGCCATGGCCTCGACGTCGCTTCCTTCCTGCCGACGATCCACGGCGTGCGGGCGATCG AGACCATCACCAACCTTGCCCTTCCAGGCGTCGACCCGGCGCATGAGGCCGACCTGCTGCTGAAAGCCGAGGCCGCCGAT CTGGATGGCATTGTCCCGATCGCCGGCGCCGTGGCATTTCTCAAGGCGCTGCCGGGCGAAAGCTGGGCGATCGTCACCTC GGCGCCGCGCTCCCTGGCGCTTGCGCGCATGGAGGCTGCCGGCATTCCTGTCCCCGCGGTCATCGTTGCGGCTGAAGACG TCTCGCGTGGCAAGCCGGCCCCTGACTGTTTCCGGCTTGGCGCACAACGGCTCGGCGTCGATGCGCGCGACTGCCTGGTG TTCGAGGATGCTCCGGCCGGCATCGCGGCGGCCGAGGCCGCGCAGGCTTCGGTCATGGTGATCAGCGCCACACATTCGCA CCCGCTGCCGACGCAGCATGCCGCGATCGCTGGCTATGACGGCGTCGGCATCACCATCGACGAGCGCGGCTGGCTGGCGC TCGAGGCCCAGCGCGACGCTGCTTGA
Upstream 100 bases:
>100_bases GGACCGCCGCAAAATACACCCTCGTGCCTTTCCATGTCCGCGCCTTGACGTTACGGTTGTGCCCTCCCTCGACGCGCTCC CCCGGATTTCAAGGAAAATC
Downstream 100 bases:
>100_bases ACCACCGGAGCGCAGGTAGCAGCCATTTGCAGGCCGGCCTCACCTGAATATCAATGCACCCTAGAAGTCGCTGGTCAGGC CTTTGACTTCCCAGTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MFAGRKFAAFLFDMDGTLINSIASAERVWSDWARRHGLDVASFLPTIHGVRAIETITNLALPGVDPAHEADLLLKAEAAD LDGIVPIAGAVAFLKALPGESWAIVTSAPRSLALARMEAAGIPVPAVIVAAEDVSRGKPAPDCFRLGAQRLGVDARDCLV FEDAPAGIAAAEAAQASVMVISATHSHPLPTQHAAIAGYDGVGITIDERGWLALEAQRDAA
Sequences:
>Translated_221_residues MFAGRKFAAFLFDMDGTLINSIASAERVWSDWARRHGLDVASFLPTIHGVRAIETITNLALPGVDPAHEADLLLKAEAAD LDGIVPIAGAVAFLKALPGESWAIVTSAPRSLALARMEAAGIPVPAVIVAAEDVSRGKPAPDCFRLGAQRLGVDARDCLV FEDAPAGIAAAEAAQASVMVISATHSHPLPTQHAAIAGYDGVGITIDERGWLALEAQRDAA >Mature_221_residues MFAGRKFAAFLFDMDGTLINSIASAERVWSDWARRHGLDVASFLPTIHGVRAIETITNLALPGVDPAHEADLLLKAEAAD LDGIVPIAGAVAFLKALPGESWAIVTSAPRSLALARMEAAGIPVPAVIVAAEDVSRGKPAPDCFRLGAQRLGVDARDCLV FEDAPAGIAAAEAAQASVMVISATHSHPLPTQHAAIAGYDGVGITIDERGWLALEAQRDAA
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI87082080, Length=182, Percent_Identity=45.0549450549451, Blast_Score=131, Evalue=4e-32, Organism=Escherichia coli, GI1789046, Length=179, Percent_Identity=33.5195530726257, Blast_Score=70, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321833, Length=197, Percent_Identity=32.994923857868, Blast_Score=93, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6321834, Length=197, Percent_Identity=31.4720812182741, Blast_Score=86, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320905, Length=190, Percent_Identity=33.1578947368421, Blast_Score=73, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6322136, Length=190, Percent_Identity=32.6315789473684, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23018; Mature: 23018
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAGRKFAAFLFDMDGTLINSIASAERVWSDWARRHGLDVASFLPTIHGVRAIETITNLA CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC LPGVDPAHEADLLLKAEAADLDGIVPIAGAVAFLKALPGESWAIVTSAPRSLALARMEAA CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHC GIPVPAVIVAAEDVSRGKPAPDCFRLGAQRLGVDARDCLVFEDAPAGIAAAEAAQASVMV CCCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHHHCCCEEEE ISATHSHPLPTQHAAIAGYDGVGITIDERGWLALEAQRDAA EEECCCCCCCCCCCEEECCCCEEEEECCCCEEEEECCCCCC >Mature Secondary Structure MFAGRKFAAFLFDMDGTLINSIASAERVWSDWARRHGLDVASFLPTIHGVRAIETITNLA CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC LPGVDPAHEADLLLKAEAADLDGIVPIAGAVAFLKALPGESWAIVTSAPRSLALARMEAA CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHC GIPVPAVIVAAEDVSRGKPAPDCFRLGAQRLGVDARDCLVFEDAPAGIAAAEAAQASVMV CCCCCEEEEEECHHHCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHHHCCCEEEE ISATHSHPLPTQHAAIAGYDGVGITIDERGWLALEAQRDAA EEECCCCCCCCCCCEEECCCCEEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]