| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473460
Identifier: 13473460
GI number: 13473460
Start: 3250353
End: 3250787
Strand: Reverse
Name: 13473460
Synonym: mll4068
Alternate gene names: NA
Gene position: 3250787-3250353 (Counterclockwise)
Preceding gene: 13473461
Following gene: 13473459
Centisome position: 46.2
GC content: 61.84
Gene sequence:
>435_bases ATGCCTGGAATTTCAAAACAGGCATTTCGAGGGGACAGTATGGATTTTGCGCTTCCTTGGCCGACGAGCCAGGGCGAATG GCTGGCCTGGTCGAGCGCCGTCTTCACCGTGCTGCTCGGGCTTCTGTTTTTCCTGGCGCCTAGCCTGGCCTTCCGCATCC TGCGCCTGCAGCCGAGGCCGGAGAAAGCGGCGGCGATCGCCGAAGGGCGCGGCAGGATGTCGGGCTTTTATCTCGGCGTC GGCCTGTGCTGCATCCTGCTGGCGCAGCCGCTGGTTTACATGGCGCTCGGCTTCTCTTGGCTGTTCACGGCCTTCGGCCG GCTGCTGTCGATGATGTCGGATGGCGCCAACACACCTTTCAATTGGGTTTCCATTGTTGTGGAATTGGTCCTGGCGGCGC TGCCGCTTGCCTTTGCCTTCGGCTTTGTGCCGTGA
Upstream 100 bases:
>100_bases AACGCCACGCGTTTCTCCCGGGAAAACCGTTTCACACTTTTCCTGGCATTGCTTTGAAAGTGCCTGATGCCATCTGGCGC GGCGCTTTTCCTCGGCTAGA
Downstream 100 bases:
>100_bases ATCCAAGGGTATTCCGGCGCATAAGGCGCGAGTCTTTCGCCGGATGCGACAATAGTGCCTGAAAAGCATGCGGAACGACG CATTGCGGTCTTAAAATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPGISKQAFRGDSMDFALPWPTSQGEWLAWSSAVFTVLLGLLFFLAPSLAFRILRLQPRPEKAAAIAEGRGRMSGFYLGV GLCCILLAQPLVYMALGFSWLFTAFGRLLSMMSDGANTPFNWVSIVVELVLAALPLAFAFGFVP
Sequences:
>Translated_144_residues MPGISKQAFRGDSMDFALPWPTSQGEWLAWSSAVFTVLLGLLFFLAPSLAFRILRLQPRPEKAAAIAEGRGRMSGFYLGV GLCCILLAQPLVYMALGFSWLFTAFGRLLSMMSDGANTPFNWVSIVVELVLAALPLAFAFGFVP >Mature_143_residues PGISKQAFRGDSMDFALPWPTSQGEWLAWSSAVFTVLLGLLFFLAPSLAFRILRLQPRPEKAAAIAEGRGRMSGFYLGVG LCCILLAQPLVYMALGFSWLFTAFGRLLSMMSDGANTPFNWVSIVVELVLAALPLAFAFGFVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15697; Mature: 15566
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGISKQAFRGDSMDFALPWPTSQGEWLAWSSAVFTVLLGLLFFLAPSLAFRILRLQPRP CCCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EKAAAIAEGRGRMSGFYLGVGLCCILLAQPLVYMALGFSWLFTAFGRLLSMMSDGANTPF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH NWVSIVVELVLAALPLAFAFGFVP HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PGISKQAFRGDSMDFALPWPTSQGEWLAWSSAVFTVLLGLLFFLAPSLAFRILRLQPRP CCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EKAAAIAEGRGRMSGFYLGVGLCCILLAQPLVYMALGFSWLFTAFGRLLSMMSDGANTPF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH NWVSIVVELVLAALPLAFAFGFVP HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA