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The map label for this gene is dadA1

Identifier: 13473406

GI number: 13473406

Start: 3193107

End: 3194363

Strand: Reverse

Name: dadA1

Synonym: mll3992

Alternate gene names: 13473406

Gene position: 3194363-3193107 (Counterclockwise)

Preceding gene: 13473407

Following gene: 13473403

Centisome position: 45.4

GC content: 64.6

Gene sequence:

>1257_bases
ATGCAGATCATGGTGCTGGGCGGCGGCGTCATCGGGGTGACCACGGCCTATTATCTCGCCGAGGCCGGCCACGAGGTGAC
GGTGCTCGATCGCCAGAAAGGCCCGGCGCTGGAAACCAGTTTTGCCAATGCCGGCGAGATTTCGCCCGGCTATGCCTCGC
CCTGGGCCGGGCCCGGCATTCCGCTAAAGGCGATCAAATGGCTGTTGATGAAGCATGGCCCACTGGTGGTTCGACCGGCC
TTCGACCCGCATATGTGGACCTGGCTGGTCAAGATGCTGCGCAACTGCACGACCGAGCGCTATGCCATCAACAAGTCGCG
CATGGTGCCGCTGGCCGAATACAGCCGCGACACGCTGAAGGCGCTGCGCGAGGCGACCGGCATCACCTATGACGAGCGCA
CCCAGGGCACGCTGCAGCTGTTTCGCACCCAAAAGCAGCTCGATGGCACCGGTGGTGACGTCGAGGTGCTGAAGAAATAT
GGCGTTTCCTACGAGATCCTCGACCAGGACGGCTGCATTGCGGCGGAGCCGGCGCTGGGCGGCGTGCGCGAGAAATTCGT
CGGCGGGCTGAGGCTGCCGCATGACGAGACCGGCGACTGCAAGATGTTCACCGAGAAACTGGCCGAGCTCTGCGTGGCGC
GTGGCGTCAAGTTCGAATACGACACGACGATCTGGCGCGTCCTTCGCAGCCGCAACCGCGTTGCCAACCTCAGCACCAGC
AAGGGGTTCAAGGCTTCCGAAGCCTATGTGATGGCGCTGGGCAGCTACTCGGCCGGCTTCATGCGCCGGATGAAACGGTC
GATCCCGGTCTATCCGGTCAAGGGCTATTCGATCACCGTGCCGATCAAGGACGCCGACGTGGCGCCGGTGTCGACCGTGA
TGGATGAGACCTACAAGGTGGCGATCACCCGGCTCGGCGACCGTATCCGCGTCGGCGGCACGGCCGAGATTTCAGGCTTC
GACCTCAGGCTCCATGAATCGCGGCGGCGCACGCTGGAACATTCGGTGGGCGATCTCTTTCCGGGCGCCGGCGCCATGCG
CGAGGCGACCTTCTGGTGCGGCCTGCGGCCGATGACGCCGGACGGGCCGCCGCTGATCGGCCGCACCGAGCTTTCCAATC
TCTTCCTCAACACCGGCCATGGCACGCTCGGCTGGACCATGGCCTGCGGTTCGGCCAAGGTGCTGGCCGACATCATGTCG
AACAAGGTGCCCGAGATCGATGCCCGTGCCCTGGCACAGGAGCGCTACCTGAAATAG

Upstream 100 bases:

>100_bases
AAAATCGGCGTCGATTTTCATTTGGGATCATGCGCAAATCGAGAAATGCGGCCGCGTCCACGGGCGTCCTGAGGATGCGC
GGCGCGGCAAGGAGTGAACG

Downstream 100 bases:

>100_bases
GCGCGGCGCGGGGAGATCAGAATGCCTGCCTGACCCAGGCTTCATCGAACAGCAGCCGATAGGCCCATGGGATCGTCACG
TTGGCGGAAACCGGATTCGA

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MQIMVLGGGVIGVTTAYYLAEAGHEVTVLDRQKGPALETSFANAGEISPGYASPWAGPGIPLKAIKWLLMKHGPLVVRPA
FDPHMWTWLVKMLRNCTTERYAINKSRMVPLAEYSRDTLKALREATGITYDERTQGTLQLFRTQKQLDGTGGDVEVLKKY
GVSYEILDQDGCIAAEPALGGVREKFVGGLRLPHDETGDCKMFTEKLAELCVARGVKFEYDTTIWRVLRSRNRVANLSTS
KGFKASEAYVMALGSYSAGFMRRMKRSIPVYPVKGYSITVPIKDADVAPVSTVMDETYKVAITRLGDRIRVGGTAEISGF
DLRLHESRRRTLEHSVGDLFPGAGAMREATFWCGLRPMTPDGPPLIGRTELSNLFLNTGHGTLGWTMACGSAKVLADIMS
NKVPEIDARALAQERYLK

Sequences:

>Translated_418_residues
MQIMVLGGGVIGVTTAYYLAEAGHEVTVLDRQKGPALETSFANAGEISPGYASPWAGPGIPLKAIKWLLMKHGPLVVRPA
FDPHMWTWLVKMLRNCTTERYAINKSRMVPLAEYSRDTLKALREATGITYDERTQGTLQLFRTQKQLDGTGGDVEVLKKY
GVSYEILDQDGCIAAEPALGGVREKFVGGLRLPHDETGDCKMFTEKLAELCVARGVKFEYDTTIWRVLRSRNRVANLSTS
KGFKASEAYVMALGSYSAGFMRRMKRSIPVYPVKGYSITVPIKDADVAPVSTVMDETYKVAITRLGDRIRVGGTAEISGF
DLRLHESRRRTLEHSVGDLFPGAGAMREATFWCGLRPMTPDGPPLIGRTELSNLFLNTGHGTLGWTMACGSAKVLADIMS
NKVPEIDARALAQERYLK
>Mature_418_residues
MQIMVLGGGVIGVTTAYYLAEAGHEVTVLDRQKGPALETSFANAGEISPGYASPWAGPGIPLKAIKWLLMKHGPLVVRPA
FDPHMWTWLVKMLRNCTTERYAINKSRMVPLAEYSRDTLKALREATGITYDERTQGTLQLFRTQKQLDGTGGDVEVLKKY
GVSYEILDQDGCIAAEPALGGVREKFVGGLRLPHDETGDCKMFTEKLAELCVARGVKFEYDTTIWRVLRSRNRVANLSTS
KGFKASEAYVMALGSYSAGFMRRMKRSIPVYPVKGYSITVPIKDADVAPVSTVMDETYKVAITRLGDRIRVGGTAEISGF
DLRLHESRRRTLEHSVGDLFPGAGAMREATFWCGLRPMTPDGPPLIGRTELSNLFLNTGHGTLGWTMACGSAKVLADIMS
NKVPEIDARALAQERYLK

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=416, Percent_Identity=54.0865384615385, Blast_Score=468, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA1_RHILO (Q98F08)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104973.1
- ProteinModelPortal:   Q98F08
- GeneID:   1227634
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll3992
- NMPDR:   fig|266835.1.peg.3077
- HOGENOM:   HBG729204
- OMA:   WQMLQNC
- ProtClustDB:   PRK00711
- BRENDA:   1.4.99.1
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 46019; Mature: 46019

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIMVLGGGVIGVTTAYYLAEAGHEVTVLDRQKGPALETSFANAGEISPGYASPWAGPGI
CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWLLMKHGPLVVRPAFDPHMWTWLVKMLRNCTTERYAINKSRMVPLAEYSRDTLK
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHEECCHHHCCCHHHHHHHHHH
ALREATGITYDERTQGTLQLFRTQKQLDGTGGDVEVLKKYGVSYEILDQDGCIAAEPALG
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCEEECCCCC
GVREKFVGGLRLPHDETGDCKMFTEKLAELCVARGVKFEYDTTIWRVLRSRNRVANLSTS
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCEECCCCC
KGFKASEAYVMALGSYSAGFMRRMKRSIPVYPVKGYSITVPIKDADVAPVSTVMDETYKV
CCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHH
AITRLGDRIRVGGTAEISGFDLRLHESRRRTLEHSVGDLFPGAGAMREATFWCGLRPMTP
HHHHCCCEEEECCCEEECCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCCCCC
DGPPLIGRTELSNLFLNTGHGTLGWTMACGSAKVLADIMSNKVPEIDARALAQERYLK
CCCCCCCHHHHHHEEEECCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQIMVLGGGVIGVTTAYYLAEAGHEVTVLDRQKGPALETSFANAGEISPGYASPWAGPGI
CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWLLMKHGPLVVRPAFDPHMWTWLVKMLRNCTTERYAINKSRMVPLAEYSRDTLK
CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCHHHEECCHHHCCCHHHHHHHHHH
ALREATGITYDERTQGTLQLFRTQKQLDGTGGDVEVLKKYGVSYEILDQDGCIAAEPALG
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCCCEEECCCCC
GVREKFVGGLRLPHDETGDCKMFTEKLAELCVARGVKFEYDTTIWRVLRSRNRVANLSTS
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCEECCCCC
KGFKASEAYVMALGSYSAGFMRRMKRSIPVYPVKGYSITVPIKDADVAPVSTVMDETYKV
CCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHH
AITRLGDRIRVGGTAEISGFDLRLHESRRRTLEHSVGDLFPGAGAMREATFWCGLRPMTP
HHHHCCCEEEECCCEEECCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCCCCC
DGPPLIGRTELSNLFLNTGHGTLGWTMACGSAKVLADIMSNKVPEIDARALAQERYLK
CCCCCCCHHHHHHEEEECCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11214968