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The map label for this gene is rnk [C]

Identifier: 13473407

GI number: 13473407

Start: 3194488

End: 3195030

Strand: Reverse

Name: rnk [C]

Synonym: mll3993

Alternate gene names: 13473407

Gene position: 3195030-3194488 (Counterclockwise)

Preceding gene: 13473408

Following gene: 13473406

Centisome position: 45.41

GC content: 66.11

Gene sequence:

>543_bases
ATGAAGAGTACGAATTGCTGTCTGACGACGAAGGACCGTGCCGTCCTCGAAGTCATGCTGGAGCGCCGGCGGGCATTCGC
GGATCCGATCGTGCATGTGCTCGAACACAAGCTTTCAAGCGCCGATGTCGTCCCGATCGATACGGTCGGCCCCGATATCG
TCACGCTGAACAGCAGGGTGGTGTTCAGCATCGATGCCGGTCACGCCCAGACGCGCACCCTGGTGCAGAACGAGGTGCGC
GGACCGGTCGGCTCCAGCCTGTCGGTGGCAACCAGGCGCGGGCTCTGCATGCTTGGCATGGCACAGGGCCAAACGGCCTC
GATCGAGCACGCCGACGGCCGGCGGGAGTCGATCCTGATCAAGGCCGTGCTTTACCAGCCGGAGGCTGCCGGGCGCGCGG
TCAGGCAGAAAGACCGGGCCGACGGGCGGCGACCGCATGGGCTCACTCTCGTCTACAGCGCCGCAGACGATTGGCAGCCT
CTTGGCGAGACGGCCGGAATGCGGCAGACAGAAGACGACGACCCCGGTCCCTCGGCGGCGTGA

Upstream 100 bases:

>100_bases
TGTGCTGGAGCAGTCGTGGCGGCCGTGAGCTGTCGGTGACCGTCGAAGCCGTCGACACGCCGGTCTCCGGCGCGCAGCGG
CGCTGATCGTGGAGGCGGTG

Downstream 100 bases:

>100_bases
ATGGGCAACAGCGTATGGTTCTCGAAAATCGGCGTCGATTTTCATTTGGGATCATGCGCAAATCGAGAAATGCGGCCGCG
TCCACGGGCGTCCTGAGGAT

Product: nucleoside diphosphate kinase regulator, Rnk

Products: NA

Alternate protein names: Nucleoside Diphosphate Kinase Regulator Rnk

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRVVFSIDAGHAQTRTLVQNEVR
GPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESILIKAVLYQPEAAGRAVRQKDRADGRRPHGLTLVYSAADDWQP
LGETAGMRQTEDDDPGPSAA

Sequences:

>Translated_180_residues
MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRVVFSIDAGHAQTRTLVQNEVR
GPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESILIKAVLYQPEAAGRAVRQKDRADGRRPHGLTLVYSAADDWQP
LGETAGMRQTEDDDPGPSAA
>Mature_180_residues
MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRVVFSIDAGHAQTRTLVQNEVR
GPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESILIKAVLYQPEAAGRAVRQKDRADGRRPHGLTLVYSAADDWQP
LGETAGMRQTEDDDPGPSAA

Specific function: Rnk And Sspa Can Functionally Replace P.Aeruginosa Alginate Regulatory Gene Algr2. [C]

COG id: COG0782

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19440; Mature: 19440

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRV
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCEE
VFSIDAGHAQTRTLVQNEVRGPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESILI
EEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEE
KAVLYQPEAAGRAVRQKDRADGRRPHGLTLVYSAADDWQPLGETAGMRQTEDDDPGPSAA
EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKSTNCCLTTKDRAVLEVMLERRRAFADPIVHVLEHKLSSADVVPIDTVGPDIVTLNSRV
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCEE
VFSIDAGHAQTRTLVQNEVRGPVGSSLSVATRRGLCMLGMAQGQTASIEHADGRRESILI
EEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEE
KAVLYQPEAAGRAVRQKDRADGRRPHGLTLVYSAADDWQPLGETAGMRQTEDDDPGPSAA
EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA