| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473379
Identifier: 13473379
GI number: 13473379
Start: 3165970
End: 3166761
Strand: Direct
Name: 13473379
Synonym: mlr3960
Alternate gene names: NA
Gene position: 3165970-3166761 (Clockwise)
Preceding gene: 13473378
Following gene: 13473380
Centisome position: 45.0
GC content: 57.45
Gene sequence:
>792_bases ATGAAATCGTCAGCGCAGCGCGCAAAGCTGACCTGGAATGCCAATCGGTTTGAGGCGTTGGAACGCATACGCGCTGTCTT GCTGGAAAGCGAGTTCAGGCCGCTCTATGCCAGCTACATCGCATATCTGGAGCTGCGGGAGCGCGGGCTGAGAAAACGAT CCTTTGCCCAGCTCGATGCCTTTATTGAGCAAATAGCTTCCGACCCGTTTGAAGTGCGCCTGTCGGTCGTGCGGCATCTC GTTGGCGCAACTGAAGAGTACTGGGACAATTGGCCAGCGCCCGACAACTGGCAGTTTCCTGAACAGATATCTCGACGGCT GACTGGACCGCTCTGGCGCGAATGGCAGGAGCGGGATCCGGCCAATCCTGAGGCATGGCTACATGGTTTTGACGATCTGT CCCGCGGAGTCGATGGCAGGGAGGTTGCGTTTCTGCTGGACCCAACTCATCCGCGCTACCAATATGCCCATCTGAATGGT CTCTGCGCGCAGCTGAACCATGAGCTTCACGAGTTGGAACACGTTGAGACAATCCTTTGCACTCCCGAACACTTTGGCAA GCTTGCCGGTTCGGTGTCCGCTGTTGCGGCGGCAATCGGTGGCAACATGACTGAAGAGGTCGCGAGAACACCTGTCCAAC TGAACGAACTGGCGGCGATCTATCGCAGCCACAAGAGGGATAGCGGTACCTTTTTGCGAGAGCTTCTGCGGCTCGGTCGC AAAGATCTGGTCGACTTTCCCATCTTGCCGGCCCGGCGTTGGTTCCGTGTGCTGCCCCATCCTCTAGGTTGA
Upstream 100 bases:
>100_bases AGAACGTCTACTGGATGACGCACGAGACCAACGCAACCGCGCGCAAGCTCTACGACCACGTGGCGCGCCGCACCGGCTTC ATCGAGTATGATCTGCTGTA
Downstream 100 bases:
>100_bases TCCGCTCGCATGTTCATCCCCTTCTTCCTCGAACTGAAGGCTGCGCGCGTTCCCGTTTCGCTCCGGGAATATCTGTCGCT GCTGGAAGGGCTGGAAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKSSAQRAKLTWNANRFEALERIRAVLLESEFRPLYASYIAYLELRERGLRKRSFAQLDAFIEQIASDPFEVRLSVVRHL VGATEEYWDNWPAPDNWQFPEQISRRLTGPLWREWQERDPANPEAWLHGFDDLSRGVDGREVAFLLDPTHPRYQYAHLNG LCAQLNHELHELEHVETILCTPEHFGKLAGSVSAVAAAIGGNMTEEVARTPVQLNELAAIYRSHKRDSGTFLRELLRLGR KDLVDFPILPARRWFRVLPHPLG
Sequences:
>Translated_263_residues MKSSAQRAKLTWNANRFEALERIRAVLLESEFRPLYASYIAYLELRERGLRKRSFAQLDAFIEQIASDPFEVRLSVVRHL VGATEEYWDNWPAPDNWQFPEQISRRLTGPLWREWQERDPANPEAWLHGFDDLSRGVDGREVAFLLDPTHPRYQYAHLNG LCAQLNHELHELEHVETILCTPEHFGKLAGSVSAVAAAIGGNMTEEVARTPVQLNELAAIYRSHKRDSGTFLRELLRLGR KDLVDFPILPARRWFRVLPHPLG >Mature_263_residues MKSSAQRAKLTWNANRFEALERIRAVLLESEFRPLYASYIAYLELRERGLRKRSFAQLDAFIEQIASDPFEVRLSVVRHL VGATEEYWDNWPAPDNWQFPEQISRRLTGPLWREWQERDPANPEAWLHGFDDLSRGVDGREVAFLLDPTHPRYQYAHLNG LCAQLNHELHELEHVETILCTPEHFGKLAGSVSAVAAAIGGNMTEEVARTPVQLNELAAIYRSHKRDSGTFLRELLRLGR KDLVDFPILPARRWFRVLPHPLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30399; Mature: 30399
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSAQRAKLTWNANRFEALERIRAVLLESEFRPLYASYIAYLELRERGLRKRSFAQLDA CCCCCCHHEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIEQIASDPFEVRLSVVRHLVGATEEYWDNWPAPDNWQFPEQISRRLTGPLWREWQERDP HHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCC ANPEAWLHGFDDLSRGVDGREVAFLLDPTHPRYQYAHLNGLCAQLNHELHELEHVETILC CCHHHHHCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC TPEHFGKLAGSVSAVAAAIGGNMTEEVARTPVQLNELAAIYRSHKRDSGTFLRELLRLGR CHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCH KDLVDFPILPARRWFRVLPHPLG HHHCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MKSSAQRAKLTWNANRFEALERIRAVLLESEFRPLYASYIAYLELRERGLRKRSFAQLDA CCCCCCHHEEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIEQIASDPFEVRLSVVRHLVGATEEYWDNWPAPDNWQFPEQISRRLTGPLWREWQERDP HHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCC ANPEAWLHGFDDLSRGVDGREVAFLLDPTHPRYQYAHLNGLCAQLNHELHELEHVETILC CCHHHHHCCHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC TPEHFGKLAGSVSAVAAAIGGNMTEEVARTPVQLNELAAIYRSHKRDSGTFLRELLRLGR CHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCH KDLVDFPILPARRWFRVLPHPLG HHHCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA