| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473380
Identifier: 13473380
GI number: 13473380
Start: 3166771
End: 3167961
Strand: Direct
Name: 13473380
Synonym: mlr3961
Alternate gene names: NA
Gene position: 3166771-3167961 (Clockwise)
Preceding gene: 13473379
Following gene: 13473381
Centisome position: 45.01
GC content: 61.54
Gene sequence:
>1191_bases ATGTTCATCCCCTTCTTCCTCGAACTGAAGGCTGCGCGCGTTCCCGTTTCGCTCCGGGAATATCTGTCGCTGCTGGAAGG GCTGGAAGCCGGGCTGGTCGACTATGACGTCGAGGGGTTTTATTACCTGGCCCGCGCCGCTTTGGTGAAGGACGAGCGCC ACATCGACCGCTTCGACCAGGTGTTCGCGCATGTCTTCAAGGGCATTGAAGCGCTAGGCGGACCGGATGCGGTCGATGTC GCCAACATTCCCGAGGAATGGCTGCGCCGGCTTGCCGAAAAGCATCTGACTGACGAGGAGAAAAAGCTGGTCGAGGCGCT CGGTGGCTTCGAAAAGCTGATGGAGTCCTTGAAGCAAAGGCTCGAGGAGCAAAAAGGCCGCCACCAGGGCGGCTCGAAAT GGGTCGGCACCGGCGGCACCTCGCCCTTCGGCGCCTATGGCTACAATCCCGAAGGCGTGCGCATCGGCCAGCACGAAAGC CGTAACCGCCGCGCGGTGAAGGTCTGGGACAAGCGCGAGTTCCGCAATTTCGACGATGCCGTCGAGCTCGGCACCCGCAA CATCAAGATCGCGCTGAAACGGCTGCGCCGCTGGGTGCGCGAAGGTGCCGAGGAAGAATTCGACCTACCCGGCACCATCC ACGCCACCGCCGAACATGGCTATCTCGACGTGCAGACGCGGCCCGAGCGCCGCAACGCGGTGAAGCTTTTGATGTTCTTC GATGTCGGCGGCTCGATGGACGACCATATCAGGAGCGTCGAGGAGCTGTTTTCGGCGGCCCGCGCCGAATTCCGCCAGCT CGAATATTTCTACTTTCACAATTGCCTCTACGAGGGTGTCTGGAAGGACAATCGCCGCCGTTATGCGGAGGTGATTCCGA CCTTCGATCTCCTCCATAAGTACGGACCGGACTACAAGGTGATCCTTGTTGGCGACGCCTCGATGAGTCCTTACGAGATC GCCCACCCCGGCGGCTCGGTCGAGCACTGGAACCCGGAGGCCGGCGCCGTCTGGCTCGGCCGCCTGCTGCAGCAATGGCC GAACGCGGTATGGCTCAATCCCGAGAGCGAAAAGAACTGGGGTTACACCCATTCGATCGCCATGATCCGCGACATCTTCG GCGGCCGCATGTTCCCGCTGACGCTGGCCGGACTCGAAACCGCGACGAAGCAGCTTTCCAGAAAGCACTGA
Upstream 100 bases:
>100_bases GCTTCTGCGGCTCGGTCGCAAAGATCTGGTCGACTTTCCCATCTTGCCGGCCCGGCGTTGGTTCCGTGTGCTGCCCCATC CTCTAGGTTGATCCGCTCGC
Downstream 100 bases:
>100_bases GCAATTTCCGGAGCCACCATGACCTGCTTCCTCTGCCTGCAATGCGGGGTTCAGTTCGCGGCCAAGGAGACGCCGCCGCA ACACTGCCCGGTCTGCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MFIPFFLELKAARVPVSLREYLSLLEGLEAGLVDYDVEGFYYLARAALVKDERHIDRFDQVFAHVFKGIEALGGPDAVDV ANIPEEWLRRLAEKHLTDEEKKLVEALGGFEKLMESLKQRLEEQKGRHQGGSKWVGTGGTSPFGAYGYNPEGVRIGQHES RNRRAVKVWDKREFRNFDDAVELGTRNIKIALKRLRRWVREGAEEEFDLPGTIHATAEHGYLDVQTRPERRNAVKLLMFF DVGGSMDDHIRSVEELFSAARAEFRQLEYFYFHNCLYEGVWKDNRRRYAEVIPTFDLLHKYGPDYKVILVGDASMSPYEI AHPGGSVEHWNPEAGAVWLGRLLQQWPNAVWLNPESEKNWGYTHSIAMIRDIFGGRMFPLTLAGLETATKQLSRKH
Sequences:
>Translated_396_residues MFIPFFLELKAARVPVSLREYLSLLEGLEAGLVDYDVEGFYYLARAALVKDERHIDRFDQVFAHVFKGIEALGGPDAVDV ANIPEEWLRRLAEKHLTDEEKKLVEALGGFEKLMESLKQRLEEQKGRHQGGSKWVGTGGTSPFGAYGYNPEGVRIGQHES RNRRAVKVWDKREFRNFDDAVELGTRNIKIALKRLRRWVREGAEEEFDLPGTIHATAEHGYLDVQTRPERRNAVKLLMFF DVGGSMDDHIRSVEELFSAARAEFRQLEYFYFHNCLYEGVWKDNRRRYAEVIPTFDLLHKYGPDYKVILVGDASMSPYEI AHPGGSVEHWNPEAGAVWLGRLLQQWPNAVWLNPESEKNWGYTHSIAMIRDIFGGRMFPLTLAGLETATKQLSRKH >Mature_396_residues MFIPFFLELKAARVPVSLREYLSLLEGLEAGLVDYDVEGFYYLARAALVKDERHIDRFDQVFAHVFKGIEALGGPDAVDV ANIPEEWLRRLAEKHLTDEEKKLVEALGGFEKLMESLKQRLEEQKGRHQGGSKWVGTGGTSPFGAYGYNPEGVRIGQHES RNRRAVKVWDKREFRNFDDAVELGTRNIKIALKRLRRWVREGAEEEFDLPGTIHATAEHGYLDVQTRPERRNAVKLLMFF DVGGSMDDHIRSVEELFSAARAEFRQLEYFYFHNCLYEGVWKDNRRRYAEVIPTFDLLHKYGPDYKVILVGDASMSPYEI AHPGGSVEHWNPEAGAVWLGRLLQQWPNAVWLNPESEKNWGYTHSIAMIRDIFGGRMFPLTLAGLETATKQLSRKH
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45554; Mature: 45554
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIPFFLELKAARVPVSLREYLSLLEGLEAGLVDYDVEGFYYLARAALVKDERHIDRFDQ CCCCCEEEHHHHCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH VFAHVFKGIEALGGPDAVDVANIPEEWLRRLAEKHLTDEEKKLVEALGGFEKLMESLKQR HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHH LEEQKGRHQGGSKWVGTGGTSPFGAYGYNPEGVRIGQHESRNRRAVKVWDKREFRNFDDA HHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECHHHHCCHHHH VELGTRNIKIALKRLRRWVREGAEEEFDLPGTIHATAEHGYLDVQTRPERRNAVKLLMFF HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEEEEE DVGGSMDDHIRSVEELFSAARAEFRQLEYFYFHNCLYEGVWKDNRRRYAEVIPTFDLLHK ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH YGPDYKVILVGDASMSPYEIAHPGGSVEHWNPEAGAVWLGRLLQQWPNAVWLNPESEKNW CCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCC GYTHSIAMIRDIFGGRMFPLTLAGLETATKQLSRKH CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFIPFFLELKAARVPVSLREYLSLLEGLEAGLVDYDVEGFYYLARAALVKDERHIDRFDQ CCCCCEEEHHHHCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHH VFAHVFKGIEALGGPDAVDVANIPEEWLRRLAEKHLTDEEKKLVEALGGFEKLMESLKQR HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHH LEEQKGRHQGGSKWVGTGGTSPFGAYGYNPEGVRIGQHESRNRRAVKVWDKREFRNFDDA HHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEEEECHHHHCCHHHH VELGTRNIKIALKRLRRWVREGAEEEFDLPGTIHATAEHGYLDVQTRPERRNAVKLLMFF HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCEEEEEEE DVGGSMDDHIRSVEELFSAARAEFRQLEYFYFHNCLYEGVWKDNRRRYAEVIPTFDLLHK ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH YGPDYKVILVGDASMSPYEIAHPGGSVEHWNPEAGAVWLGRLLQQWPNAVWLNPESEKNW CCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCC GYTHSIAMIRDIFGGRMFPLTLAGLETATKQLSRKH CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA