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The map label for this gene is czcR [H]

Identifier: 13473353

GI number: 13473353

Start: 3143775

End: 3144632

Strand: Direct

Name: czcR [H]

Synonym: mlr3918

Alternate gene names: 13473353

Gene position: 3143775-3144632 (Clockwise)

Preceding gene: 13473351

Following gene: 13473354

Centisome position: 44.68

GC content: 66.2

Gene sequence:

>858_bases
ATGCTGGAAGAATTGCGCACGCTTGTCCTCTTCGCCGAGGAAGGCTCGATCCAGAATGTGGCCCGCCGCCTGCCTTTGAC
GCAGCCGGCCGTCACCCGGCAGATGCAGCGGCTGGAGGACATGCTCGCGACAACGCTTCTCGATCGCCGGCAGAAGCCGC
CGCGGCTGACCGCGGCGGGATTGGAGGTGCTGGCGCGCGCAAAGGACATACTGGCTTCGGTCGAGGCTCTGAAAGCGTTC
GCCGCCGACGCCGAGCCGCAGGGCGTGCTGCGTGTCGGCCTGGCGCATGGCTTGTCCGATGCAAGCATCGCGGGCGCCAT
CGCCGGCGCGGCCGCCGCGTTTCCAAAGATATCGTTGCGGCTCAAGACCGGCTGGAGCGCTGAGCTGATCGAGCAGTTCG
AACGCGGTCAACTCGATATGGCGATCGTTCTGCGACCTGCCGATCATCAAGGCCCGGACGCGCTCGGCACCGAACGTCTC
TGCATCATAGCGCAAGCCGGCGCCCATCTCACGGACGCTCGGGTCCCCATGCCCTGGGTTCTCAGCCCCGAGCCTTGCGA
CGCGCGCCAGACGCTCCTCTCCAGTTTGGGCGGCGAGCGGCATCCGCTCATCGTGGCGGCGGAAATTCAGGACCCGGCGA
TGCAGATGGAATGGGTCCGTCGGGGACACGGCCTCGGCCTCATGCCGTTGCGGCTCGCGGCGCGAGGACTTCCCGACGGC
CTCGCGCTTGTCGATCTCGAAGATGTCGACCTTTCATTGCAGGTCGTGGCACTACGCTCGCCACATCTCAACCGGCTGGC
GAAGGCCGTGGAGGCCATTGCACAAACCGTCGGCGAAGCCATCAAGATCGAGGCCTGA

Upstream 100 bases:

>100_bases
CGCTTTCCTTTTGAAAATCCGTCGAAAGGAAAATCGCTTGCCGGCAGCCTGATTTCAAATTCATAATAATCAGAATGATT
ATGCATTTGAGGACCGAAGG

Downstream 100 bases:

>100_bases
TACCGGCTGACCGACTGGGACCGATCGGGCGTCCCTTGCCTCTCCGGACGATTTGTGGTCTTGGGAGCCCCTAAATCGCC
AGTCCCGGCGAAAATCTCAT

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLEELRTLVLFAEEGSIQNVARRLPLTQPAVTRQMQRLEDMLATTLLDRRQKPPRLTAAGLEVLARAKDILASVEALKAF
AADAEPQGVLRVGLAHGLSDASIAGAIAGAAAAFPKISLRLKTGWSAELIEQFERGQLDMAIVLRPADHQGPDALGTERL
CIIAQAGAHLTDARVPMPWVLSPEPCDARQTLLSSLGGERHPLIVAAEIQDPAMQMEWVRRGHGLGLMPLRLAARGLPDG
LALVDLEDVDLSLQVVALRSPHLNRLAKAVEAIAQTVGEAIKIEA

Sequences:

>Translated_285_residues
MLEELRTLVLFAEEGSIQNVARRLPLTQPAVTRQMQRLEDMLATTLLDRRQKPPRLTAAGLEVLARAKDILASVEALKAF
AADAEPQGVLRVGLAHGLSDASIAGAIAGAAAAFPKISLRLKTGWSAELIEQFERGQLDMAIVLRPADHQGPDALGTERL
CIIAQAGAHLTDARVPMPWVLSPEPCDARQTLLSSLGGERHPLIVAAEIQDPAMQMEWVRRGHGLGLMPLRLAARGLPDG
LALVDLEDVDLSLQVVALRSPHLNRLAKAVEAIAQTVGEAIKIEA
>Mature_285_residues
MLEELRTLVLFAEEGSIQNVARRLPLTQPAVTRQMQRLEDMLATTLLDRRQKPPRLTAAGLEVLARAKDILASVEALKAF
AADAEPQGVLRVGLAHGLSDASIAGAIAGAAAAFPKISLRLKTGWSAELIEQFERGQLDMAIVLRPADHQGPDALGTERL
CIIAQAGAHLTDARVPMPWVLSPEPCDARQTLLSSLGGERHPLIVAAEIQDPAMQMEWVRRGHGLGLMPLRLAARGLPDG
LALVDLEDVDLSLQVVALRSPHLNRLAKAVEAIAQTVGEAIKIEA

Specific function: Could Be The Regulator Of The Abg Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787601, Length=206, Percent_Identity=26.6990291262136, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787806, Length=168, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788626, Length=199, Percent_Identity=26.1306532663317, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787530, Length=145, Percent_Identity=26.2068965517241, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790399, Length=144, Percent_Identity=27.7777777777778, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 30601; Mature: 30601

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEELRTLVLFAEEGSIQNVARRLPLTQPAVTRQMQRLEDMLATTLLDRRQKPPRLTAAG
CHHHHEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LEVLARAKDILASVEALKAFAADAEPQGVLRVGLAHGLSDASIAGAIAGAAAAFPKISLR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEE
LKTGWSAELIEQFERGQLDMAIVLRPADHQGPDALGTERLCIIAQAGAHLTDARVPMPWV
EECCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
LSPEPCDARQTLLSSLGGERHPLIVAAEIQDPAMQMEWVRRGHGLGLMPLRLAARGLPDG
CCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCC
LALVDLEDVDLSLQVVALRSPHLNRLAKAVEAIAQTVGEAIKIEA
EEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MLEELRTLVLFAEEGSIQNVARRLPLTQPAVTRQMQRLEDMLATTLLDRRQKPPRLTAAG
CHHHHEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LEVLARAKDILASVEALKAFAADAEPQGVLRVGLAHGLSDASIAGAIAGAAAAFPKISLR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEE
LKTGWSAELIEQFERGQLDMAIVLRPADHQGPDALGTERLCIIAQAGAHLTDARVPMPWV
EECCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
LSPEPCDARQTLLSSLGGERHPLIVAAEIQDPAMQMEWVRRGHGLGLMPLRLAARGLPDG
CCCCCCCHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCC
LALVDLEDVDLSLQVVALRSPHLNRLAKAVEAIAQTVGEAIKIEA
EEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA