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The map label for this gene is 13473187

Identifier: 13473187

GI number: 13473187

Start: 2985149

End: 2985313

Strand: Direct

Name: 13473187

Synonym: msr3702

Alternate gene names: NA

Gene position: 2985149-2985313 (Clockwise)

Preceding gene: 82791995

Following gene: 13473188

Centisome position: 42.43

GC content: 59.39

Gene sequence:

>165_bases
ATGCTTTACTGGGCGCTCGTATTTCTCGTCGTGGCGATCATCGCCGGCGCGCTTGGTTTCGGCGGCATCGCCGGTACATC
CGCCGGCATAGCGCAGATATTGTTCTTCATCTTTCTCGCCTTCCTGGTCATTTCGCTCCTGGCCGGCCTGTTCAGACGGG
CGTGA

Upstream 100 bases:

>100_bases
AATTGCTCTAACGATTTGCAAGCATCGCCTTTTTCGGCAAAGGGTGGAACAAACCGCACCCACCCACGTTTTCCCTGCAG
CATTCGGAAGGAGATGAACC

Downstream 100 bases:

>100_bases
GGGCGAACGCTTCTTCGAGCGAACACTGGAAGCCGCACCCCTCAAACGGTTTCCAGCCACCGCCGGGCGGTATCCTTCAA
AGGGAGACCGTCCGGCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MLYWALVFLVVAIIAGALGFGGIAGTSAGIAQILFFIFLAFLVISLLAGLFRRA

Sequences:

>Translated_54_residues
MLYWALVFLVVAIIAGALGFGGIAGTSAGIAQILFFIFLAFLVISLLAGLFRRA
>Mature_54_residues
MLYWALVFLVVAIIAGALGFGGIAGTSAGIAQILFFIFLAFLVISLLAGLFRRA

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3702_RHILO (Q98FM7)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104754.1
- GeneID:   1227415
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:msr3702
- NMPDR:   fig|266835.1.peg.2858
- OMA:   RYAVIFF
- ProtClustDB:   PRK13682
- HAMAP:   MF_01361
- InterPro:   IPR009760
- PIRSF:   PIRSF036466

Pfam domain/function: PF07043 DUF1328

EC number: NA

Molecular weight: Translated: 5675; Mature: 5675

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10d540a4)-; HASH(0x1057f924)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYWALVFLVVAIIAGALGFGGIAGTSAGIAQILFFIFLAFLVISLLAGLFRRA
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MLYWALVFLVVAIIAGALGFGGIAGTSAGIAQILFFIFLAFLVISLLAGLFRRA
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968