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The map label for this gene is phyR [H]

Identifier: 82791995

GI number: 82791995

Start: 2984029

End: 2984823

Strand: Direct

Name: phyR [H]

Synonym: mlr3700

Alternate gene names: 82791995

Gene position: 2984029-2984823 (Clockwise)

Preceding gene: 13473183

Following gene: 13473187

Centisome position: 42.41

GC content: 62.64

Gene sequence:

>795_bases
ATGAGTTTATCCGCCACCATCGCACCGCACCTGCCGTTCCTGCGCCGCTTCTCGCGCGCCGTCTCGGGATCGCAAGAGAG
CGGCGACGCGCTGGTCGCTGCGATGCTTGAGGCCATCATCGCCGATGTCGACATCTTCCCCGACGCATCGAGCGACCGTA
TCGCCCTTTACAAGGTCTTCGCCAAACTTTTCACGTCCGTCGCCATCCGCGTGCCGCAGGAGCAGGCCCAATCGGCGTGG
GAACAGCGTGCCGCCGCCAATCTCAATGCCATCGCGCCCCTTCCGCGCCAGGCCTTCCTGCTGGTTGCCGTCGAAGGTTT
CAGCGAAGACGAGGCGGCCGAGATCCTCGACGTCGGCGACCAGCAATTCTCCGAGCTGCTTGCCCAGGCAAGCAACGAGA
TTTCCCGGCAGGTGGCGACCGATGTGCTCATCATCGAGGACGAACCGCTGATCGCCATGGACATAGAGGAGATGGTCGAG
AGCCTCGGTCATCGTGTCGTTGGAACGGCGCGCACGCATGCCGAAGCGGTGACGATGTTCGGCAAGACACGACCGAAGAT
GGTTCTGGCCGACATCCAGCTCGCCGACGGCAGTTCGGGCATCGAGGCGGTCAACGAGATCCTGTCGTCAACCTCTGTGC
CGGTGATCTTCATCACTGCTTTTCCCGAACGCCTTCTGACTGGCGAGCGCCCCGAACCGGCCTTCCTGGTGACCAAGCCG
TTCAATCCCGACATGGTCAAGGCACTAATCAGCCAGGCGCTGTTCTTCGACCGTCAGGCGAAGGCCGCCGCATAG

Upstream 100 bases:

>100_bases
TCCATATCGGCCGGAACTTTTTGAGAAAATACGCGTTGTATTAGCGGGGCTTGCAATCAGCTTGACCTGCAACGCGTCAT
ACTGAGGGAGACGTCTTATC

Downstream 100 bases:

>100_bases
GGGCGCGACCTTTCCAGCCGGGAAAGCAAACCAAAGGCCGCCCGATGCGATGTGTCGGGCGGCCTTTTTGGCAACCGGAC
CCATCAGTCGCGAATTTGAA

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSLSATIAPHLPFLRRFSRAVSGSQESGDALVAAMLEAIIADVDIFPDASSDRIALYKVFAKLFTSVAIRVPQEQAQSAW
EQRAAANLNAIAPLPRQAFLLVAVEGFSEDEAAEILDVGDQQFSELLAQASNEISRQVATDVLIIEDEPLIAMDIEEMVE
SLGHRVVGTARTHAEAVTMFGKTRPKMVLADIQLADGSSGIEAVNEILSSTSVPVIFITAFPERLLTGERPEPAFLVTKP
FNPDMVKALISQALFFDRQAKAAA

Sequences:

>Translated_264_residues
MSLSATIAPHLPFLRRFSRAVSGSQESGDALVAAMLEAIIADVDIFPDASSDRIALYKVFAKLFTSVAIRVPQEQAQSAW
EQRAAANLNAIAPLPRQAFLLVAVEGFSEDEAAEILDVGDQQFSELLAQASNEISRQVATDVLIIEDEPLIAMDIEEMVE
SLGHRVVGTARTHAEAVTMFGKTRPKMVLADIQLADGSSGIEAVNEILSSTSVPVIFITAFPERLLTGERPEPAFLVTKP
FNPDMVKALISQALFFDRQAKAAA
>Mature_263_residues
SLSATIAPHLPFLRRFSRAVSGSQESGDALVAAMLEAIIADVDIFPDASSDRIALYKVFAKLFTSVAIRVPQEQAQSAWE
QRAAANLNAIAPLPRQAFLLVAVEGFSEDEAAEILDVGDQQFSELLAQASNEISRQVATDVLIIEDEPLIAMDIEEMVES
LGHRVVGTARTHAEAVTMFGKTRPKMVLADIQLADGSSGIEAVNEILSSTSVPVIFITAFPERLLTGERPEPAFLVTKPF
NPDMVKALISQALFFDRQAKAAA

Specific function: Key regulator for adaptation to epiphytic life (leaf colonizing) of the bacterium. Positively regulates several genes including katE, sodA, hsp20, dps and gloA. However it is not known whether this regulation is direct or indirect. Also induces several de

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR014605
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28509; Mature: 28378

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSATIAPHLPFLRRFSRAVSGSQESGDALVAAMLEAIIADVDIFPDASSDRIALYKVF
CCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
AKLFTSVAIRVPQEQAQSAWEQRAAANLNAIAPLPRQAFLLVAVEGFSEDEAAEILDVGD
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCH
QQFSELLAQASNEISRQVATDVLIIEDEPLIAMDIEEMVESLGHRVVGTARTHAEAVTMF
HHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEECHHHHHHHHCHHHCCCHHHHHHHHHHH
GKTRPKMVLADIQLADGSSGIEAVNEILSSTSVPVIFITAFPERLLTGERPEPAFLVTKP
CCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCEEEECC
FNPDMVKALISQALFFDRQAKAAA
CCHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
SLSATIAPHLPFLRRFSRAVSGSQESGDALVAAMLEAIIADVDIFPDASSDRIALYKVF
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
AKLFTSVAIRVPQEQAQSAWEQRAAANLNAIAPLPRQAFLLVAVEGFSEDEAAEILDVGD
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCH
QQFSELLAQASNEISRQVATDVLIIEDEPLIAMDIEEMVESLGHRVVGTARTHAEAVTMF
HHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEECHHHHHHHHCHHHCCCHHHHHHHHHHH
GKTRPKMVLADIQLADGSSGIEAVNEILSSTSVPVIFITAFPERLLTGERPEPAFLVTKP
CCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCEEEECC
FNPDMVKALISQALFFDRQAKAAA
CCHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA