| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473170
Identifier: 13473170
GI number: 13473170
Start: 2971226
End: 2971471
Strand: Direct
Name: 13473170
Synonym: msr3678
Alternate gene names: NA
Gene position: 2971226-2971471 (Clockwise)
Preceding gene: 13473169
Following gene: 13473175
Centisome position: 42.23
GC content: 63.82
Gene sequence:
>246_bases ATGGCCGGCGAAGCAGAGCTGGAGGCGGCCGAGCAGTGGGAGCTGGTCAACACGCCACTTGGCGAGAAATGGTCCGGGCG CACGCGCTATGCCGCCGCCATGTTCTTCTACAAGCGCGGCGAGATGAGCGCCGAGACGCTCGAGGTCTACCGCATCTGCG CGCGGCTTGATTCGGAAAACCCGCTGCCGATCATCCGCGACCGCGACGTCGGCAAGAATTGGCTCAAAAGGATCGGCTTC GAGTAG
Upstream 100 bases:
>100_bases AGCTGCAGTATCAGAAGCTGATGAAACGGGCCAAGGTGGTGGCGCGGCCCTTCATCAAGCTCGACCGCCGCACCGCCAAT CCGCCGGCGGATTTCTGACC
Downstream 100 bases:
>100_bases CGCCTGCGCACTAGCCAATGGTTCTTTCGAGCATACCCAGCCAATTGCGATACGCGATCTTCTCGATCAGCGCGCGGCCA AAACCACGCGCGGCCAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MAGEAELEAAEQWELVNTPLGEKWSGRTRYAAAMFFYKRGEMSAETLEVYRICARLDSENPLPIIRDRDVGKNWLKRIGF E
Sequences:
>Translated_81_residues MAGEAELEAAEQWELVNTPLGEKWSGRTRYAAAMFFYKRGEMSAETLEVYRICARLDSENPLPIIRDRDVGKNWLKRIGF E >Mature_80_residues AGEAELEAAEQWELVNTPLGEKWSGRTRYAAAMFFYKRGEMSAETLEVYRICARLDSENPLPIIRDRDVGKNWLKRIGFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9383; Mature: 9252
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEAELEAAEQWELVNTPLGEKWSGRTRYAAAMFFYKRGEMSAETLEVYRICARLDSEN CCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC PLPIIRDRDVGKNWLKRIGFE CCCEECCCCCCHHHHHHCCCC >Mature Secondary Structure AGEAELEAAEQWELVNTPLGEKWSGRTRYAAAMFFYKRGEMSAETLEVYRICARLDSEN CCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC PLPIIRDRDVGKNWLKRIGFE CCCEECCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA