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The map label for this gene is p49 [H]

Identifier: 13473168

GI number: 13473168

Start: 2968395

End: 2969960

Strand: Direct

Name: p49 [H]

Synonym: mlr3676

Alternate gene names: 13473168

Gene position: 2968395-2969960 (Clockwise)

Preceding gene: 13473167

Following gene: 13473169

Centisome position: 42.19

GC content: 66.48

Gene sequence:

>1566_bases
ATGACGTCATTTGATGCAATCGTCATCGGCGGCGGCCACAATGGCCTTGTCGCCGCAGCCACGTTGGCCAAAGCCGGCCG
CAAGGTGCTGGTGTTGGAGGCTGAAAGCGAAGTCGGCGGTGCCGCGCGCACCGAGGAATTCGCCCCGGGCTTTCGCGTCT
CGTCGATCGCCCATCTGCTGAACCGTCTGCATCCCGATGTGGTGAAGACGCTGGAGCTGGAGACGCATGGGCTGCAATTC
GCACGCGCGGACTTCCTGCCGTCGGCGGCGCTGTCGAAGGACGGCCCGGCGCTGATGCTGCATGGCGCCTATGGCGAGGT
GCTGACGGGCGCCAGTCCCTCCGAACAGTCGGCCTGGAAAGACCTGCGCGCGCAGCTGCTACGCTATGCCGGCATCCTGA
AGCCCTTCCTCACCCGCCGGCCGCCCGATCTCGCCGGCATGTCGTTGATGGAGACCGCTTCGCTCGGCCAGACCGCGCTG
GCGCTGAAAAAACTCGGCAAGGAAGACATGCGCGACTTCCTGCGCGTTCTGTTGATGAACGTCGCCGACCTGCTCGACGA
GCAACTCAGGGATGACAGGCTGAAAGGCCTGCTCGCCTTCGACGCCACGCTCGGCAGCCATCTCGGCCCGCGCTCGCCGA
CCTCGCTGCTCGGCCTCTACTATCGCCTGGCTGGCGAGGCCGGCGGAGCGGCCGGCGCGCAGGTCCTGCCGCAAGGCGGC
ATGGGCGCCGTCGTCGCCGCCATTCGCGCCGCGGCGGAGAAGGCCGGCGTCACCATCCGCACGTCGGTTGCAGCAGCAAA
AATCATCGTCGAGAAGGGCCATGCCGTCGGTGTCACCCTCGGCACTGGCGAGGAACTGCGCGCCAGGACTGTTGTCTCGG
CGATCAATCCGGCGACCACTTTTCTCGACCTTGTCGGGCCGCGCGAGATCGACACCGGCTTCGTGCGCAAGGTGAAAAAC
ATCCGCATGAAGGGCGATGCCGCCAAGCTGCATCTGGCGCTCGACCGGTCGCCGCAATTCACCGGCGCCGATGCTGCCGC
TCACAAGGGCCGGCTGGTGATCGCGCCCTCGCCCGATCATGTCGAGCGCGCCTTCAACCCTTGCAAGTATGGCGAATTCT
CGCCTGAGCCGGTGCTGGAAATCACGCTGCCCAGCCTCGCCGATCCATCGCTCGCGCCGGATGGCGCCTGTGTGCTCTCG
GCGGTGGTGCAATACGCGCCCTACGCGTTGAAGGAGGGGTGGGCTGCGGGCAAGCCGAAATTCATCAAGGCAGTCATGGC
GCAGCTCGAGGCTTACGCGCCTGGCATCGGCAAGAGCGTTGTTCACGCCGAGCTTTTGACGCCGGCCGATATCGAGACGC
GTTACCGCATGCCCGGCGGTCACTGGCACCATGGCGAGCTGCAGGCCGACCAGATGCTGATCTCACGACCCGTCTCCGGC
TGGTCAGGCTACGACACGCCGGTCGAAGGGCTATTCCTGGCCGGCGCCGGCTCGCATCCCGGTGGCGGCGTCTCCGGCGC
TCCTGGCTTGAACGCCGCGCGGCGCATCATTGCGATGAAGGGATAG

Upstream 100 bases:

>100_bases
ACTCATCCGGGCGGCGGTGTCATGGGCGCGCCCGGCCGCAATGCCGCCGCCGAAATCCTGCGCGATCTCGCCAAATCCAC
CTCGCATATGAGCCTCGCCC

Downstream 100 bases:

>100_bases
GTCATGGCCCAGGCAACCAGGAAGAAGCCCGTTGCAAAGACGGCCGATGCGGCTGTCTCCGCCCGCATCGCCGCGCAATC
GCATTTCCGCACGCTGCGCC

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MTSFDAIVIGGGHNGLVAAATLAKAGRKVLVLEAESEVGGAARTEEFAPGFRVSSIAHLLNRLHPDVVKTLELETHGLQF
ARADFLPSAALSKDGPALMLHGAYGEVLTGASPSEQSAWKDLRAQLLRYAGILKPFLTRRPPDLAGMSLMETASLGQTAL
ALKKLGKEDMRDFLRVLLMNVADLLDEQLRDDRLKGLLAFDATLGSHLGPRSPTSLLGLYYRLAGEAGGAAGAQVLPQGG
MGAVVAAIRAAAEKAGVTIRTSVAAAKIIVEKGHAVGVTLGTGEELRARTVVSAINPATTFLDLVGPREIDTGFVRKVKN
IRMKGDAAKLHLALDRSPQFTGADAAAHKGRLVIAPSPDHVERAFNPCKYGEFSPEPVLEITLPSLADPSLAPDGACVLS
AVVQYAPYALKEGWAAGKPKFIKAVMAQLEAYAPGIGKSVVHAELLTPADIETRYRMPGGHWHHGELQADQMLISRPVSG
WSGYDTPVEGLFLAGAGSHPGGGVSGAPGLNAARRIIAMKG

Sequences:

>Translated_521_residues
MTSFDAIVIGGGHNGLVAAATLAKAGRKVLVLEAESEVGGAARTEEFAPGFRVSSIAHLLNRLHPDVVKTLELETHGLQF
ARADFLPSAALSKDGPALMLHGAYGEVLTGASPSEQSAWKDLRAQLLRYAGILKPFLTRRPPDLAGMSLMETASLGQTAL
ALKKLGKEDMRDFLRVLLMNVADLLDEQLRDDRLKGLLAFDATLGSHLGPRSPTSLLGLYYRLAGEAGGAAGAQVLPQGG
MGAVVAAIRAAAEKAGVTIRTSVAAAKIIVEKGHAVGVTLGTGEELRARTVVSAINPATTFLDLVGPREIDTGFVRKVKN
IRMKGDAAKLHLALDRSPQFTGADAAAHKGRLVIAPSPDHVERAFNPCKYGEFSPEPVLEITLPSLADPSLAPDGACVLS
AVVQYAPYALKEGWAAGKPKFIKAVMAQLEAYAPGIGKSVVHAELLTPADIETRYRMPGGHWHHGELQADQMLISRPVSG
WSGYDTPVEGLFLAGAGSHPGGGVSGAPGLNAARRIIAMKG
>Mature_520_residues
TSFDAIVIGGGHNGLVAAATLAKAGRKVLVLEAESEVGGAARTEEFAPGFRVSSIAHLLNRLHPDVVKTLELETHGLQFA
RADFLPSAALSKDGPALMLHGAYGEVLTGASPSEQSAWKDLRAQLLRYAGILKPFLTRRPPDLAGMSLMETASLGQTALA
LKKLGKEDMRDFLRVLLMNVADLLDEQLRDDRLKGLLAFDATLGSHLGPRSPTSLLGLYYRLAGEAGGAAGAQVLPQGGM
GAVVAAIRAAAEKAGVTIRTSVAAAKIIVEKGHAVGVTLGTGEELRARTVVSAINPATTFLDLVGPREIDTGFVRKVKNI
RMKGDAAKLHLALDRSPQFTGADAAAHKGRLVIAPSPDHVERAFNPCKYGEFSPEPVLEITLPSLADPSLAPDGACVLSA
VVQYAPYALKEGWAAGKPKFIKAVMAQLEAYAPGIGKSVVHAELLTPADIETRYRMPGGHWHHGELQADQMLISRPVSGW
SGYDTPVEGLFLAGAGSHPGGGVSGAPGLNAARRIIAMKG

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=542, Percent_Identity=34.8708487084871, Blast_Score=270, Evalue=3e-72,
Organism=Caenorhabditis elegans, GI17540238, Length=521, Percent_Identity=32.8214971209213, Blast_Score=266, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54663; Mature: 54531

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFDAIVIGGGHNGLVAAATLAKAGRKVLVLEAESEVGGAARTEEFAPGFRVSSIAHLL
CCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHCCCCCHHHHHHHHH
NRLHPDVVKTLELETHGLQFARADFLPSAALSKDGPALMLHGAYGEVLTGASPSEQSAWK
HHHCHHHHHHHHHHHCCCHHHHHHCCCCHHCCCCCCEEEEECCCCHHHCCCCCCHHHHHH
DLRAQLLRYAGILKPFLTRRPPDLAGMSLMETASLGQTALALKKLGKEDMRDFLRVLLMN
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHH
VADLLDEQLRDDRLKGLLAFDATLGSHLGPRSPTSLLGLYYRLAGEAGGAAGAQVLPQGG
HHHHHHHHHHHHHHHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
MGAVVAAIRAAAEKAGVTIRTSVAAAKIIVEKGHAVGVTLGTGEELRARTVVSAINPATT
HHHHHHHHHHHHHHCCCEEEEHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHCCHHHH
FLDLVGPREIDTGFVRKVKNIRMKGDAAKLHLALDRSPQFTGADAAAHKGRLVIAPSPDH
HHHHCCCCCCCHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCHHHHCCEEEEECCCHH
VERAFNPCKYGEFSPEPVLEITLPSLADPSLAPDGACVLSAVVQYAPYALKEGWAAGKPK
HHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHH
FIKAVMAQLEAYAPGIGKSVVHAELLTPADIETRYRMPGGHWHHGELQADQMLISRPVSG
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCC
WSGYDTPVEGLFLAGAGSHPGGGVSGAPGLNAARRIIAMKG
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHEEEECC
>Mature Secondary Structure 
TSFDAIVIGGGHNGLVAAATLAKAGRKVLVLEAESEVGGAARTEEFAPGFRVSSIAHLL
CCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHCCCCCHHHHHHHHH
NRLHPDVVKTLELETHGLQFARADFLPSAALSKDGPALMLHGAYGEVLTGASPSEQSAWK
HHHCHHHHHHHHHHHCCCHHHHHHCCCCHHCCCCCCEEEEECCCCHHHCCCCCCHHHHHH
DLRAQLLRYAGILKPFLTRRPPDLAGMSLMETASLGQTALALKKLGKEDMRDFLRVLLMN
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHH
VADLLDEQLRDDRLKGLLAFDATLGSHLGPRSPTSLLGLYYRLAGEAGGAAGAQVLPQGG
HHHHHHHHHHHHHHHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
MGAVVAAIRAAAEKAGVTIRTSVAAAKIIVEKGHAVGVTLGTGEELRARTVVSAINPATT
HHHHHHHHHHHHHHCCCEEEEHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHCCHHHH
FLDLVGPREIDTGFVRKVKNIRMKGDAAKLHLALDRSPQFTGADAAAHKGRLVIAPSPDH
HHHHCCCCCCCHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCHHHHCCEEEEECCCHH
VERAFNPCKYGEFSPEPVLEITLPSLADPSLAPDGACVLSAVVQYAPYALKEGWAAGKPK
HHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCHH
FIKAVMAQLEAYAPGIGKSVVHAELLTPADIETRYRMPGGHWHHGELQADQMLISRPVSG
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCC
WSGYDTPVEGLFLAGAGSHPGGGVSGAPGLNAARRIIAMKG
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]