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The map label for this gene is betI [H]

Identifier: 13473165

GI number: 13473165

Start: 2965048

End: 2965713

Strand: Reverse

Name: betI [H]

Synonym: mll3671

Alternate gene names: 13473165

Gene position: 2965713-2965048 (Counterclockwise)

Preceding gene: 13473166

Following gene: 13473164

Centisome position: 42.15

GC content: 62.61

Gene sequence:

>666_bases
ATGAAAACGGCAGACGCCAAGGATGCCCTCCTTGAACCGGCGGGGAAAGCCGAGACCGAAAAGCGCGGACGCAAGGCTTC
GAAGGAGGTCCGTCAGCTGCAGCTGATCGAGGCGACGATCGATTCGCTGGCCAAACGCGGCTATGCCGAGACGACGATGG
CCGATGTCGCCGATGGCGCGGGCCTCTCGCGTGGCATCGTCAACTTCCATTTCGAGAGCAAGGAAAAGCTGCTGATCGCG
ACGCTGCAGCACATGTATGACGAGTATTCGGCGCATTGGCGCGCCGCCCTGGAGAAGGCAGGCGACGATCCGGCGCGGCA
GCTGCAACAGCTGGTCTGGGCCGACTTCGACCGCTCGATCTGCAACAAGCGCAAGCTCGCCGCCTGGCTGGCCTTTTGGG
GCGAGGCCAAATCGCGTCCGACCTATCAGGCGCTGAGCAGTTCGCGTGATGCCTATTACCAGCAGGTCTTCATCGATCTC
TGCACGACGCTCAAGCAAAGCGGCTCATATGCCTATGAGCCGCAGGTGATGGCGCTGGCGCTGTCGGCCATGCTGGAGGG
GCTGTGGCTGCGGCTGATGATGGGCACCGAGGACACGACGCGCGAAACAGCCTTGCAGGCCGCCAACGCTTTCTTGGCCG
CTGCCTTCCCGAAGCATTACGGTTAG

Upstream 100 bases:

>100_bases
GCAGAAGGTGCTTGACAGTGGCGAGCACCGTCCCACTCATCTGCGCGGTTGGAAGCCGGATGCGATTGGATAGCCGGCGA
TGCTGGAGACGATCACACCC

Downstream 100 bases:

>100_bases
CAACAGCCGGCCGCCAAGACCGGCAAGACCAAAAGAGGATGGAACAGCATGAAGAACCTTAGCCGACGCCTGACATTGAC
ATTGGCGCTGGGCGGCGCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKTADAKDALLEPAGKAETEKRGRKASKEVRQLQLIEATIDSLAKRGYAETTMADVADGAGLSRGIVNFHFESKEKLLIA
TLQHMYDEYSAHWRAALEKAGDDPARQLQQLVWADFDRSICNKRKLAAWLAFWGEAKSRPTYQALSSSRDAYYQQVFIDL
CTTLKQSGSYAYEPQVMALALSAMLEGLWLRLMMGTEDTTRETALQAANAFLAAAFPKHYG

Sequences:

>Translated_221_residues
MKTADAKDALLEPAGKAETEKRGRKASKEVRQLQLIEATIDSLAKRGYAETTMADVADGAGLSRGIVNFHFESKEKLLIA
TLQHMYDEYSAHWRAALEKAGDDPARQLQQLVWADFDRSICNKRKLAAWLAFWGEAKSRPTYQALSSSRDAYYQQVFIDL
CTTLKQSGSYAYEPQVMALALSAMLEGLWLRLMMGTEDTTRETALQAANAFLAAAFPKHYG
>Mature_221_residues
MKTADAKDALLEPAGKAETEKRGRKASKEVRQLQLIEATIDSLAKRGYAETTMADVADGAGLSRGIVNFHFESKEKLLIA
TLQHMYDEYSAHWRAALEKAGDDPARQLQQLVWADFDRSICNKRKLAAWLAFWGEAKSRPTYQALSSSRDAYYQQVFIDL
CTTLKQSGSYAYEPQVMALALSAMLEGLWLRLMMGTEDTTRETALQAANAFLAAAFPKHYG

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=199, Percent_Identity=29.1457286432161, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24665; Mature: 24665

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTADAKDALLEPAGKAETEKRGRKASKEVRQLQLIEATIDSLAKRGYAETTMADVADGA
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
GLSRGIVNFHFESKEKLLIATLQHMYDEYSAHWRAALEKAGDDPARQLQQLVWADFDRSI
CHHCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
CNKRKLAAWLAFWGEAKSRPTYQALSSSRDAYYQQVFIDLCTTLKQSGSYAYEPQVMALA
HHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LSAMLEGLWLRLMMGTEDTTRETALQAANAFLAAAFPKHYG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTADAKDALLEPAGKAETEKRGRKASKEVRQLQLIEATIDSLAKRGYAETTMADVADGA
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
GLSRGIVNFHFESKEKLLIATLQHMYDEYSAHWRAALEKAGDDPARQLQQLVWADFDRSI
CHHCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
CNKRKLAAWLAFWGEAKSRPTYQALSSSRDAYYQQVFIDLCTTLKQSGSYAYEPQVMALA
HHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LSAMLEGLWLRLMMGTEDTTRETALQAANAFLAAAFPKHYG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA