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The map label for this gene is yeaW [H]

Identifier: 13473157

GI number: 13473157

Start: 2955535

End: 2956737

Strand: Direct

Name: yeaW [H]

Synonym: mlr3662

Alternate gene names: 13473157

Gene position: 2955535-2956737 (Clockwise)

Preceding gene: 13473155

Following gene: 13473159

Centisome position: 42.01

GC content: 62.26

Gene sequence:

>1203_bases
ATGAACCCGCACCTCCGTGACGTGGCGATCCCCAACGATTGGGACCGGCGGGGACTACCGGGCTGGAGTTACCATTCCGA
TGCCCTTCTCGAGCTCGAGAAGGAGCATGTCTTTCGCAACCACTGGCAGATCGTCGGCCATGTCTCCGACATCCCGAACG
CCGGCGATTATCTGACCATGGATGTGGTCGGCGAACGCGCTTTGATCGTGCGCGGCAAGGACGGCGTCGTGCGCGGTTTC
AACAATATGTGCCGCCACCGCGGCAGCCGTGTCGTCGCCGACAGCCAGGGCAATTGCAAGAACGCGCTGGTGTGCCCGTT
CCATGGCTGGGTCTACAATCTCGACGGCACGCTGCGCGGCGCCGCGCGCCCGCGCTCCTTCCCCGATCTCGACAAGACCG
AGTTCGGCCTGATGCAGCTCGATCTCGAAGTCTGGATGGGCTTCATCTTCATCCGTTTCCGCAATGGCGGGCCGCAGCCT
TCGGTCGCCGAGCTGATGAAGCCGATCGAGCCCGAATTCGCGCATTACAAGGCCGCCGACATGGTGCCGTCCTGGGGCAT
CTGGACCCAGAAGACACCGGTCAACTGGAAGTCGGTGCGCGATGTCGACAATGAGGGCTATCACGTCGCCATGGCGCATC
CTGCCCTGCAGGACCTTTATGGCGCGACCTATTTCGACGAGCCCTTCATCAACGGCGTGTCGCGCTCCTTTGCCACCTAC
AACCCGCATGCCGGCCGCCGCTGGAGCGTCAAGAACTACGTCAAGATCGCGCCAGAGCCGACGCATCTGCCGGACCATCT
GAAGAAGGCCTGGGGCTATTACGGCATCTTCCCCAACGCGGTCATTTCGGTGATGCCGGAATCGGTGCAGTTCTATCAGG
AGTTTCCGCTGTCGACGGGCGAGACCCTGCTGCGCGGCGCCATCTACCGTTACCGCGACGAAAGCCGCGAACAGGCCGCC
GCCCGCTACCTCTCCTTCCGCATCGACCGCGACACCATGTCGGAAGATGTCCAGCTGTCGGTGTGGTCGAACGAATCCAT
GCTGTCAGAAGCCTTCGAGGGTTTTTACCTCTCCGACCTCGAATATGGCGTGCGCACCCATCACGACCATCTGCGCAAGA
TGCTGCCCGTGCTGGGCCTTGAGACGGCGCCGGAGGAGAAGGACATGTGGAATTTGAACGACGCGCTGAGGTCGCGGTCG
TAG

Upstream 100 bases:

>100_bases
GACTCCGTCCAAAAATTCTTGCTATTTCCACAAGCCATTGCATTTCAATGCAAAATATGATTTTATTGAATGATTATTCA
ACAAAAAGAAGAGACGTTTT

Downstream 100 bases:

>100_bases
CTTCCTTCTCCCCGTGAAACGGGGAGAAGGAATGATGTTACCCCCGCCACACGCCCTCTTTCCACAGATCATCCATGGTC
CGCGAAATGCCTTCGCGCAA

Product: dioxygenase alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNPHLRDVAIPNDWDRRGLPGWSYHSDALLELEKEHVFRNHWQIVGHVSDIPNAGDYLTMDVVGERALIVRGKDGVVRGF
NNMCRHRGSRVVADSQGNCKNALVCPFHGWVYNLDGTLRGAARPRSFPDLDKTEFGLMQLDLEVWMGFIFIRFRNGGPQP
SVAELMKPIEPEFAHYKAADMVPSWGIWTQKTPVNWKSVRDVDNEGYHVAMAHPALQDLYGATYFDEPFINGVSRSFATY
NPHAGRRWSVKNYVKIAPEPTHLPDHLKKAWGYYGIFPNAVISVMPESVQFYQEFPLSTGETLLRGAIYRYRDESREQAA
ARYLSFRIDRDTMSEDVQLSVWSNESMLSEAFEGFYLSDLEYGVRTHHDHLRKMLPVLGLETAPEEKDMWNLNDALRSRS

Sequences:

>Translated_400_residues
MNPHLRDVAIPNDWDRRGLPGWSYHSDALLELEKEHVFRNHWQIVGHVSDIPNAGDYLTMDVVGERALIVRGKDGVVRGF
NNMCRHRGSRVVADSQGNCKNALVCPFHGWVYNLDGTLRGAARPRSFPDLDKTEFGLMQLDLEVWMGFIFIRFRNGGPQP
SVAELMKPIEPEFAHYKAADMVPSWGIWTQKTPVNWKSVRDVDNEGYHVAMAHPALQDLYGATYFDEPFINGVSRSFATY
NPHAGRRWSVKNYVKIAPEPTHLPDHLKKAWGYYGIFPNAVISVMPESVQFYQEFPLSTGETLLRGAIYRYRDESREQAA
ARYLSFRIDRDTMSEDVQLSVWSNESMLSEAFEGFYLSDLEYGVRTHHDHLRKMLPVLGLETAPEEKDMWNLNDALRSRS
>Mature_400_residues
MNPHLRDVAIPNDWDRRGLPGWSYHSDALLELEKEHVFRNHWQIVGHVSDIPNAGDYLTMDVVGERALIVRGKDGVVRGF
NNMCRHRGSRVVADSQGNCKNALVCPFHGWVYNLDGTLRGAARPRSFPDLDKTEFGLMQLDLEVWMGFIFIRFRNGGPQP
SVAELMKPIEPEFAHYKAADMVPSWGIWTQKTPVNWKSVRDVDNEGYHVAMAHPALQDLYGATYFDEPFINGVSRSFATY
NPHAGRRWSVKNYVKIAPEPTHLPDHLKKAWGYYGIFPNAVISVMPESVQFYQEFPLSTGETLLRGAIYRYRDESREQAA
ARYLSFRIDRDTMSEDVQLSVWSNESMLSEAFEGFYLSDLEYGVRTHHDHLRKMLPVLGLETAPEEKDMWNLNDALRSRS

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=304, Percent_Identity=28.6184210526316, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1788888, Length=138, Percent_Identity=34.7826086956522, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 45909; Mature: 45909

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHLRDVAIPNDWDRRGLPGWSYHSDALLELEKEHVFRNHWQIVGHVSDIPNAGDYLTM
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEE
DVVGERALIVRGKDGVVRGFNNMCRHRGSRVVADSQGNCKNALVCPFHGWVYNLDGTLRG
EECCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCEEEECCCCEEC
AARPRSFPDLDKTEFGLMQLDLEVWMGFIFIRFRNGGPQPSVAELMKPIEPEFAHYKAAD
CCCCCCCCCCCCCHHHHHEEEHHHHEEEEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHH
MVPSWGIWTQKTPVNWKSVRDVDNEGYHVAMAHPALQDLYGATYFDEPFINGVSRSFATY
CCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHCCC
NPHAGRRWSVKNYVKIAPEPTHLPDHLKKAWGYYGIFPNAVISVMPESVQFYQEFPLSTG
CCCCCCEECCCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCCCH
ETLLRGAIYRYRDESREQAAARYLSFRIDRDTMSEDVQLSVWSNESMLSEAFEGFYLSDL
HHHHHHHHHHHHHHHHHHHHHHHHHEEECHHCCCCCEEEEEECCHHHHHHHHCCEEEHHH
EYGVRTHHDHLRKMLPVLGLETAPEEKDMWNLNDALRSRS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MNPHLRDVAIPNDWDRRGLPGWSYHSDALLELEKEHVFRNHWQIVGHVSDIPNAGDYLTM
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEE
DVVGERALIVRGKDGVVRGFNNMCRHRGSRVVADSQGNCKNALVCPFHGWVYNLDGTLRG
EECCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCEEEECCCCEEC
AARPRSFPDLDKTEFGLMQLDLEVWMGFIFIRFRNGGPQPSVAELMKPIEPEFAHYKAAD
CCCCCCCCCCCCCHHHHHEEEHHHHEEEEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHH
MVPSWGIWTQKTPVNWKSVRDVDNEGYHVAMAHPALQDLYGATYFDEPFINGVSRSFATY
CCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHCCC
NPHAGRRWSVKNYVKIAPEPTHLPDHLKKAWGYYGIFPNAVISVMPESVQFYQEFPLSTG
CCCCCCEECCCCEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCCCH
ETLLRGAIYRYRDESREQAAARYLSFRIDRDTMSEDVQLSVWSNESMLSEAFEGFYLSDL
HHHHHHHHHHHHHHHHHHHHHHHHHEEECHHCCCCCEEEEEECCHHHHHHHHCCEEEHHH
EYGVRTHHDHLRKMLPVLGLETAPEEKDMWNLNDALRSRS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]