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The map label for this gene is ompR [H]

Identifier: 13473154

GI number: 13473154

Start: 2951483

End: 2952208

Strand: Direct

Name: ompR [H]

Synonym: mlr3657

Alternate gene names: 13473154

Gene position: 2951483-2952208 (Clockwise)

Preceding gene: 13473152

Following gene: 13473155

Centisome position: 41.95

GC content: 66.8

Gene sequence:

>726_bases
GTGCGGGCAAGAATAGTGATCGTCGAGGACGAGCCCGACCTGAGGGACGCGGTTGCCGAATATCTCGGCGCCGCCGGCTA
TGATGTGGCGACCGCCGAAACGGCCGCCGCCGCGCGCAGCCTGATCGAGACCCAAGCCTTCCATCTGGCCATTCTCGACA
TCGCCATGCCCGGCGAGGACGGGCTGTCGCTCGGCCGCTGGCTGCGCTCGAGAATGCCGATCGGCATCATCTACGCGACC
GCCGCCGGCACGGCGCTCGACCGCATCGTCGGGCTGGAGCTCGGAGCCGACGACTATATCGTCAAGCCATACGAACTGCG
CGAAGTGCTGGCGAGGGTGCGCAGCGTGCTGCGGCGCGTTCCGCAGCCGACCGAACTGCTCGACAGGAAGACCAGGACGG
ACCGCCGTTCCGTCACCTTCGGCCCGTTCCAGGCCGATCTCGACGGCAGGCTGGTCACCGGCGCCAACGGCACCGTGATC
GACATGGCCAAGAGCGAATTCGACGTGCTGGAGGTTTTCCTGACCCGCGCCAACCGGCTGCTGACCCGCGCCGCGATCTC
GGAGGCGATCGGCTTCACCGAGGATCCGGAATCGTCGCGCGCCGTCGACATCCGCATCATGCGCCTGCGCAAGAAAATCG
AGGCCGATCCGGCCAACCCGAAATTCCTGCGCACGGTGCGCGGCGAAGGCTATATCTTCTCGCTGCCGACCGGCGACAGC
AACTGA

Upstream 100 bases:

>100_bases
CAGCCATGTTTTCCAACCGTTCCCTTGCAACCGGATATGAGTGCTGGACATGATGTTTATACCCAATCTACTTTCCACTG
AAAGTGGGAGCGAGAGCATC

Downstream 100 bases:

>100_bases
GCGCGAGGGCCTGTAGGGGTCACAGGTTCACAGCCGTTGTTCGCCGATCGACTGGGCCGATCGGATTGACGTGACTTTGG
AATAACGGCTGAAAATGACG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRARIVIVEDEPDLRDAVAEYLGAAGYDVATAETAAAARSLIETQAFHLAILDIAMPGEDGLSLGRWLRSRMPIGIIYAT
AAGTALDRIVGLELGADDYIVKPYELREVLARVRSVLRRVPQPTELLDRKTRTDRRSVTFGPFQADLDGRLVTGANGTVI
DMAKSEFDVLEVFLTRANRLLTRAAISEAIGFTEDPESSRAVDIRIMRLRKKIEADPANPKFLRTVRGEGYIFSLPTGDS
N

Sequences:

>Translated_241_residues
MRARIVIVEDEPDLRDAVAEYLGAAGYDVATAETAAAARSLIETQAFHLAILDIAMPGEDGLSLGRWLRSRMPIGIIYAT
AAGTALDRIVGLELGADDYIVKPYELREVLARVRSVLRRVPQPTELLDRKTRTDRRSVTFGPFQADLDGRLVTGANGTVI
DMAKSEFDVLEVFLTRANRLLTRAAISEAIGFTEDPESSRAVDIRIMRLRKKIEADPANPKFLRTVRGEGYIFSLPTGDS
N
>Mature_241_residues
MRARIVIVEDEPDLRDAVAEYLGAAGYDVATAETAAAARSLIETQAFHLAILDIAMPGEDGLSLGRWLRSRMPIGIIYAT
AAGTALDRIVGLELGADDYIVKPYELREVLARVRSVLRRVPQPTELLDRKTRTDRRSVTFGPFQADLDGRLVTGANGTVI
DMAKSEFDVLEVFLTRANRLLTRAAISEAIGFTEDPESSRAVDIRIMRLRKKIEADPANPKFLRTVRGEGYIFSLPTGDS
N

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=236, Percent_Identity=38.9830508474576, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1787229, Length=236, Percent_Identity=35.5932203389831, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=34.2105263157895, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786784, Length=238, Percent_Identity=36.5546218487395, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787375, Length=233, Percent_Identity=30.4721030042918, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1786599, Length=238, Percent_Identity=32.3529411764706, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=29.8701298701299, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI87082012, Length=231, Percent_Identity=32.034632034632, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=30.6034482758621, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1790860, Length=231, Percent_Identity=29.8701298701299, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789402, Length=235, Percent_Identity=31.063829787234, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1786911, Length=238, Percent_Identity=32.7731092436975, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790552, Length=231, Percent_Identity=29.004329004329, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26547; Mature: 26547

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARIVIVEDEPDLRDAVAEYLGAAGYDVATAETAAAARSLIETQAFHLAILDIAMPGED
CCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCC
GLSLGRWLRSRMPIGIIYATAAGTALDRIVGLELGADDYIVKPYELREVLARVRSVLRRV
CHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHEECCCCCEECCHHHHHHHHHHHHHHHHC
PQPTELLDRKTRTDRRSVTFGPFQADLDGRLVTGANGTVIDMAKSEFDVLEVFLTRANRL
CCCHHHHHHHHCCCCCCEEECCEEECCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHH
LTRAAISEAIGFTEDPESSRAVDIRIMRLRKKIEADPANPKFLRTVRGEGYIFSLPTGDS
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHEECCCCEEEECCCCCC
N
C
>Mature Secondary Structure
MRARIVIVEDEPDLRDAVAEYLGAAGYDVATAETAAAARSLIETQAFHLAILDIAMPGED
CCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCC
GLSLGRWLRSRMPIGIIYATAAGTALDRIVGLELGADDYIVKPYELREVLARVRSVLRRV
CHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHEECCCCCEECCHHHHHHHHHHHHHHHHC
PQPTELLDRKTRTDRRSVTFGPFQADLDGRLVTGANGTVIDMAKSEFDVLEVFLTRANRL
CCCHHHHHHHHCCCCCCEEECCEEECCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHH
LTRAAISEAIGFTEDPESSRAVDIRIMRLRKKIEADPANPKFLRTVRGEGYIFSLPTGDS
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHEECCCCEEEECCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]