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The map label for this gene is yphH [C]

Identifier: 13473139

GI number: 13473139

Start: 2936373

End: 2937611

Strand: Reverse

Name: yphH [C]

Synonym: mll3638

Alternate gene names: 13473139

Gene position: 2937611-2936373 (Counterclockwise)

Preceding gene: 13473146

Following gene: 13473138

Centisome position: 41.75

GC content: 66.83

Gene sequence:

>1239_bases
ATGGAGTCAAGAGGGGAAAAGCCGGTGGACGACATCAGCCCGATCCGCGCCAAAAGCGGCACCAACCAGGAAGGCACCAG
CGCACATAATCGCCGGGTCATGATCGAGGCGCTGCGCCTCAATGGCGCCCTGTCGCGAGCCGACCTGGCGCGGGCGACGC
AGCTCACCAAGCAGGCGGTCTCCAACATCATCGAGGACCTCGAAAGCGACGGCCTGGTCGTCGCGCTCGATGCAGTGCGC
AAGGGCAGGGGGCAGCCGTCGACCCCCTACAGGCTGGTGCCCGAGGGCGCCTTCGCCATCGGCCTGCATATCGACCGCCA
TCTGACGCGCGCTGTGGCCGTCGACCTGATGGGCAGCGTGCTGGCGCGGGCCGAGGCGAACCTGCCTTTCGATGAGCCGT
CGAAGGGCGTCGAGATCATCCTGAAGCTGATTGCAGGTGTGCGCCGTGACCTGGCCGACATTTCGGCGCAGTCGGAAAAA
CGCCTGGTTGGTCTCGGCGTTGCCATGCCCGGTCCTTTCGGACTGAAGGATTCGGACGACAAATGGATGATGCCGGCCTG
GCAGAAATTTCCGCTGCTGGAGACGCTGGCCAAAGGCACGGGGCTGAATGTCGGCCTGCAGAACGATGCCGCCGCCTGCG
CCACCGCCGAACGTATCGTCGGCGCGGCGCATGGCGTCGACCACGCTGTCTGCCTCTATGTCGGCTACGGCATCGGCGCC
GGGCTGATCCTCAATGGCGAACTCTACAGCGGCGGCCATGGCAATGCCGGCGAAATCGGCATGGCGCTGCTGGCGCCGGC
CGGCCCGGGCTCGACGCCGCTCGAGCATCGCGCTTCGCTGGCTTCGCTCTACCAGCATCTCGCCCTCAACCCGGCGGACA
GCGATATCTACGAGCAGATGAACGCCCTGGTGCTGGCCGAAGATACGAAGATGATGGCCTGGATCGACGGGGCCGCGCAT
GATCTGCGCTGGAGCGTGCATCTCATCGAGACGATCTTCGATCCGCAGACCGTGATCCTGACCAGCGGCGCGCCGGAAGC
GCTGGCGCGCCGGCTCGTCGAGGCGATGCACCCGCTGCTGCCGTCGATCGCCGACCGGCCAGGAAGGAACCTGCCGCGCC
TGCAACTCGGCACCACCGACCCCTGGTCGATCGCGCTGGGCGCTGCCGCGGCACCGATCAGCCGCGCCTTCGATCCGCTG
TTCTCGGCGATCCTGAAGACGCGATCCAGCGGCGCCTGA

Upstream 100 bases:

>100_bases
GACCAGTGGCGACAGGCGGAGCGCCTTGGCCATCTTGTTTTGGGACATTCGGTTTGCATTAAGTCAACTCGCTTGACTTA
ATTAGTCGATCAATATTCTA

Downstream 100 bases:

>100_bases
AGCGTCGACCGCCCGGCTTTTCGCCTGGGATATCCCTCAGAGGTTGTGTTCGATATCGTCATACAGGGTTCATTGTGCGG
ACATAGCGTTCGTCCCGGTT

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MESRGEKPVDDISPIRAKSGTNQEGTSAHNRRVMIEALRLNGALSRADLARATQLTKQAVSNIIEDLESDGLVVALDAVR
KGRGQPSTPYRLVPEGAFAIGLHIDRHLTRAVAVDLMGSVLARAEANLPFDEPSKGVEIILKLIAGVRRDLADISAQSEK
RLVGLGVAMPGPFGLKDSDDKWMMPAWQKFPLLETLAKGTGLNVGLQNDAAACATAERIVGAAHGVDHAVCLYVGYGIGA
GLILNGELYSGGHGNAGEIGMALLAPAGPGSTPLEHRASLASLYQHLALNPADSDIYEQMNALVLAEDTKMMAWIDGAAH
DLRWSVHLIETIFDPQTVILTSGAPEALARRLVEAMHPLLPSIADRPGRNLPRLQLGTTDPWSIALGAAAAPISRAFDPL
FSAILKTRSSGA

Sequences:

>Translated_412_residues
MESRGEKPVDDISPIRAKSGTNQEGTSAHNRRVMIEALRLNGALSRADLARATQLTKQAVSNIIEDLESDGLVVALDAVR
KGRGQPSTPYRLVPEGAFAIGLHIDRHLTRAVAVDLMGSVLARAEANLPFDEPSKGVEIILKLIAGVRRDLADISAQSEK
RLVGLGVAMPGPFGLKDSDDKWMMPAWQKFPLLETLAKGTGLNVGLQNDAAACATAERIVGAAHGVDHAVCLYVGYGIGA
GLILNGELYSGGHGNAGEIGMALLAPAGPGSTPLEHRASLASLYQHLALNPADSDIYEQMNALVLAEDTKMMAWIDGAAH
DLRWSVHLIETIFDPQTVILTSGAPEALARRLVEAMHPLLPSIADRPGRNLPRLQLGTTDPWSIALGAAAAPISRAFDPL
FSAILKTRSSGA
>Mature_412_residues
MESRGEKPVDDISPIRAKSGTNQEGTSAHNRRVMIEALRLNGALSRADLARATQLTKQAVSNIIEDLESDGLVVALDAVR
KGRGQPSTPYRLVPEGAFAIGLHIDRHLTRAVAVDLMGSVLARAEANLPFDEPSKGVEIILKLIAGVRRDLADISAQSEK
RLVGLGVAMPGPFGLKDSDDKWMMPAWQKFPLLETLAKGTGLNVGLQNDAAACATAERIVGAAHGVDHAVCLYVGYGIGA
GLILNGELYSGGHGNAGEIGMALLAPAGPGSTPLEHRASLASLYQHLALNPADSDIYEQMNALVLAEDTKMMAWIDGAAH
DLRWSVHLIETIFDPQTVILTSGAPEALARRLVEAMHPLLPSIADRPGRNLPRLQLGTTDPWSIALGAAAAPISRAFDPL
FSAILKTRSSGA

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=339, Percent_Identity=25.3687315634218, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787878, Length=345, Percent_Identity=24.9275362318841, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 43640; Mature: 43640

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRGEKPVDDISPIRAKSGTNQEGTSAHNRRVMIEALRLNGALSRADLARATQLTKQAV
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHH
SNIIEDLESDGLVVALDAVRKGRGQPSTPYRLVPEGAFAIGLHIDRHLTRAVAVDLMGSV
HHHHHHHCCCCEEEEEEHHHCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHH
LARAEANLPFDEPSKGVEIILKLIAGVRRDLADISAQSEKRLVGLGVAMPGPFGLKDSDD
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCC
KWMMPAWQKFPLLETLAKGTGLNVGLQNDAAACATAERIVGAAHGVDHAVCLYVGYGIGA
CCCCCHHHHCHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCC
GLILNGELYSGGHGNAGEIGMALLAPAGPGSTPLEHRASLASLYQHLALNPADSDIYEQM
CEEECCEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
NALVLAEDTKMMAWIDGAAHDLRWSVHLIETIFDPQTVILTSGAPEALARRLVEAMHPLL
CEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH
PSIADRPGRNLPRLQLGTTDPWSIALGAAAAPISRAFDPLFSAILKTRSSGA
HHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MESRGEKPVDDISPIRAKSGTNQEGTSAHNRRVMIEALRLNGALSRADLARATQLTKQAV
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHH
SNIIEDLESDGLVVALDAVRKGRGQPSTPYRLVPEGAFAIGLHIDRHLTRAVAVDLMGSV
HHHHHHHCCCCEEEEEEHHHCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHH
LARAEANLPFDEPSKGVEIILKLIAGVRRDLADISAQSEKRLVGLGVAMPGPFGLKDSDD
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCC
KWMMPAWQKFPLLETLAKGTGLNVGLQNDAAACATAERIVGAAHGVDHAVCLYVGYGIGA
CCCCCHHHHCHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCC
GLILNGELYSGGHGNAGEIGMALLAPAGPGSTPLEHRASLASLYQHLALNPADSDIYEQM
CEEECCEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
NALVLAEDTKMMAWIDGAAHDLRWSVHLIETIFDPQTVILTSGAPEALARRLVEAMHPLL
CEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHH
PSIADRPGRNLPRLQLGTTDPWSIALGAAAAPISRAFDPLFSAILKTRSSGA
HHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]