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The map label for this gene is ycjR [C]

Identifier: 13473103

GI number: 13473103

Start: 2898420

End: 2899313

Strand: Reverse

Name: ycjR [C]

Synonym: mll3595

Alternate gene names: 13473103

Gene position: 2899313-2898420 (Counterclockwise)

Preceding gene: 13473104

Following gene: 13473102

Centisome position: 41.21

GC content: 63.31

Gene sequence:

>894_bases
ATGGCGCGCATCGGAATCCATTCTTTTGTCTGGTCGGCAAGCTCCGCACAGAGCGAGCTTGAACGCACGCTGGCCAACAC
CAGGGAGGCCGGCTTCGACCTGATCGAATTCTCCTATCTCGACCCGGCCGATGTCGACATTGGCGGGCTTGCCAAACGCA
TCGCCGATCTCGGCCTCGGCGTGGCGATCAGCATCGGATTGCCTGGTGACGGCGACATATCGAGCGCCGACAAGGCGGTC
GCCGCGCGGGGCGTCGAGATCCTCAACGAGACCGTCGCGCTGACGCGCGATCTTGGCGGCCGCAAGGTCGCCGGCATCCT
GTCGGCCGGCCATGGCCTGCAGCTCGAAGCGCCGACGCGCGATCAATGGAGCCGCAGCACTGCTGCACTGGCGAAAGTTG
CCGAGACGGCGAAGGCGGCCGGTGTCACGCTCAATCTCGAAATCGTCAACCGCTTCGAAAGCAATCTGCTCAACACCGCC
GCGCAAGGTCTCGCCTTCATCGAGGATACCGGCTCGGACAACATCTTCCTGCATCTCGACACGTTCCACATGAACATCGA
GGAGGCCGATGTCGGACTGGCCATCCGCCACGCCGCGGGCAAGATCGGCTATGTCCATATCGGCGAGAGCCATCGCGGTT
TCCTCGGCACCGGCAATATCGACTTCGCAGCGATTTTCGATGCGCTGACCGCCGTCGGCTATGCCGACGATCTCAGCTTC
GAATCCTTCTCGTCGGAGATCGTCGACGAGAACCTGTCGAAGAAGACTGCCATCTGGCGCAATCTGTGGGCCGACAACAT
GGCGCTCGCCAAGCACGCGCGCGCCTTCATCGGCCTTGGGCTGGAGACGGCGCGGCGCAAGGCGGAACTGGTCTCGGCCC
GTCACAAGCCGTAG

Upstream 100 bases:

>100_bases
GGACTACAAGGGCTGGACCGCGGCCCGCTGATCACTCCAACAAGCGCGGCCGGATTTGTCCGGCCGCGTCTTTCTTCATC
GCCGCAAACCGGAGACGATC

Downstream 100 bases:

>100_bases
GCTCCGCGGGCGGCAGGTCTCTCCAGGCCGTGCTGTCTGGGTGCGTAAACGCCGCTCGTTGTCATCGCGCATGCATTGCC
CCGGTCCCATGCATCGGCTA

Product: putative D-tagatose 3-epimerase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MARIGIHSFVWSASSAQSELERTLANTREAGFDLIEFSYLDPADVDIGGLAKRIADLGLGVAISIGLPGDGDISSADKAV
AARGVEILNETVALTRDLGGRKVAGILSAGHGLQLEAPTRDQWSRSTAALAKVAETAKAAGVTLNLEIVNRFESNLLNTA
AQGLAFIEDTGSDNIFLHLDTFHMNIEEADVGLAIRHAAGKIGYVHIGESHRGFLGTGNIDFAAIFDALTAVGYADDLSF
ESFSSEIVDENLSKKTAIWRNLWADNMALAKHARAFIGLGLETARRKAELVSARHKP

Sequences:

>Translated_297_residues
MARIGIHSFVWSASSAQSELERTLANTREAGFDLIEFSYLDPADVDIGGLAKRIADLGLGVAISIGLPGDGDISSADKAV
AARGVEILNETVALTRDLGGRKVAGILSAGHGLQLEAPTRDQWSRSTAALAKVAETAKAAGVTLNLEIVNRFESNLLNTA
AQGLAFIEDTGSDNIFLHLDTFHMNIEEADVGLAIRHAAGKIGYVHIGESHRGFLGTGNIDFAAIFDALTAVGYADDLSF
ESFSSEIVDENLSKKTAIWRNLWADNMALAKHARAFIGLGLETARRKAELVSARHKP
>Mature_296_residues
ARIGIHSFVWSASSAQSELERTLANTREAGFDLIEFSYLDPADVDIGGLAKRIADLGLGVAISIGLPGDGDISSADKAVA
ARGVEILNETVALTRDLGGRKVAGILSAGHGLQLEAPTRDQWSRSTAALAKVAETAKAAGVTLNLEIVNRFESNLLNTAA
QGLAFIEDTGSDNIFLHLDTFHMNIEEADVGLAIRHAAGKIGYVHIGESHRGFLGTGNIDFAAIFDALTAVGYADDLSFE
SFSSEIVDENLSKKTAIWRNLWADNMALAKHARAFIGLGLETARRKAELVSARHKP

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hyi family [H]

Homologues:

Organism=Escherichia coli, GI87081874, Length=113, Percent_Identity=30.9734513274336, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 31623; Mature: 31492

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIGIHSFVWSASSAQSELERTLANTREAGFDLIEFSYLDPADVDIGGLAKRIADLGLG
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC
VAISIGLPGDGDISSADKAVAARGVEILNETVALTRDLGGRKVAGILSAGHGLQLEAPTR
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCEEECCCC
DQWSRSTAALAKVAETAKAAGVTLNLEIVNRFESNLLNTAAQGLAFIEDTGSDNIFLHLD
HHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEEE
TFHMNIEEADVGLAIRHAAGKIGYVHIGESHRGFLGTGNIDFAAIFDALTAVGYADDLSF
EEEEEEECCCCCEEEEECCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCH
ESFSSEIVDENLSKKTAIWRNLWADNMALAKHARAFIGLGLETARRKAELVSARHKP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARIGIHSFVWSASSAQSELERTLANTREAGFDLIEFSYLDPADVDIGGLAKRIADLGLG
CCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC
VAISIGLPGDGDISSADKAVAARGVEILNETVALTRDLGGRKVAGILSAGHGLQLEAPTR
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCEEECCCC
DQWSRSTAALAKVAETAKAAGVTLNLEIVNRFESNLLNTAAQGLAFIEDTGSDNIFLHLD
HHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEEEEE
TFHMNIEEADVGLAIRHAAGKIGYVHIGESHRGFLGTGNIDFAAIFDALTAVGYADDLSF
EEEEEEECCCCCEEEEECCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCH
ESFSSEIVDENLSKKTAIWRNLWADNMALAKHARAFIGLGLETARRKAELVSARHKP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA