| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473099
Identifier: 13473099
GI number: 13473099
Start: 2893855
End: 2895111
Strand: Reverse
Name: 13473099
Synonym: mll3590
Alternate gene names: NA
Gene position: 2895111-2893855 (Counterclockwise)
Preceding gene: 13473100
Following gene: 13473098
Centisome position: 41.15
GC content: 60.86
Gene sequence:
>1257_bases ATGGCTATAGCGGTGGTTGCGGCCGGAGGATTTTGGGCCGTCGCGGCCCAGGCCGAGGAAACCGTCGCATGGTGGGATTT CCTCGGCGGCGGTGACGGCGTGCGCATGAAGCAGATGATCTCCGACTTCAACGCCGCCCACGTCGGCAAGATCAAGATCG ACGCCACGACGCTGGAGTGGGGCACGCCCTTCTACGCGAAGGTGCAGACCTCGGCCGCGGTCGGTGAGGCGCCGGACGTC ATGACCTATCATGCAAGCCGCATCCCCCTGGCGGTGAGCCAGGACCTTCTCGAAGAAATCACCGCCGACGACATGAGCAA GATGGGCCTTTCGGCTTCGGACTTCGCCCAGACGACGATGGGCGCCGTCACGGTCGACGGCAAACAATACGCAGTGCCGC TCGATACCCATCCAATCGTCCTGTACTACAATCGCGTCCTCCTGAAGAAGGCAGGCGTGCTCGGCGACGACGGCCGTCCG GTGGGCATGAAAAACAAGGAGGAATTCACCGCGACACTGCAGAAGTTGAAGGATGCCGGCGTCGAATTCCCGTTGGGCAG CGTCACCGCCGACGGCAACTTCATGTACCGCACCATTTATTCGCTGGTGTGCCAGCAAGGCGGCGAGCTTCTGACGGGTA ACGAGTTCCTCGCCGGCGACAACGGCAAGAAGCTGGCCAACGCCTTGGCGGTTCTGCAAGGGTGGACGAAGGCCGGGCTG CAGTCGACCTATACCGACTATCCCGCAACCGTCGCCCTGTTCACCTCGGGCAAGGCGGCAATGATGATCAACGGCGTCTG GGAAGTTCCCACGATGACCGACCTCGCCAAGCAAGGCAAGCTGTTCGACTGGGGCGCCGTCGAGATCCCGGTGATCTTCG ACAAACCATGCACCTATGCGGACAGCCATTCGTTCGCGATCCCGAAGAACAAGGGCAAGGAGATCAGCCCGGAAAAGCGT GCCGCCGTTCTCGAGGTGATCTCATGGATCGACAAGCACTCGCTGTTCTGGGCCACGGCAGGCCACATCCCGGCATACAA GCCAGTCACCGAGACGGCCGAATATAAGGCAATGCAGCCCAATGCGACCTACTCGACGCTGACGGCCAACATGATCTTCG ATCCGAAGTCGACCAAGGCTGGTGTCGCCGGGCCGATCTTCGACATCATGTCCAATTATTTCGTGCCGACCCTCAACGGC GAGATGGACCCGGGCGAGGCGGTGAAATCCATCAAGGAAGAGTTGAACAGCATGTAA
Upstream 100 bases:
>100_bases AATCCGTTGCAGGCGGTTTGGTTTGGTGTAGCATTGAAACGTTCAAGGCGGATCTAACCGCCGTACTCGGGAGGAAGCTG AGATGAACTTTCGCAGGATG
Downstream 100 bases:
>100_bases GGCTCAAGGCTGGGGCCGTCCTGCCCAGGGCAGCCCCGGCCGTGTTTCGAGGAAGAGCCATGCTTCGCAACTCCCGCACT GAACGTCTTGTCGCACTGGT
Product: sugar transporter sugar binding protein
Products: NA
Alternate protein names: Sugar ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MAIAVVAAGGFWAVAAQAEETVAWWDFLGGGDGVRMKQMISDFNAAHVGKIKIDATTLEWGTPFYAKVQTSAAVGEAPDV MTYHASRIPLAVSQDLLEEITADDMSKMGLSASDFAQTTMGAVTVDGKQYAVPLDTHPIVLYYNRVLLKKAGVLGDDGRP VGMKNKEEFTATLQKLKDAGVEFPLGSVTADGNFMYRTIYSLVCQQGGELLTGNEFLAGDNGKKLANALAVLQGWTKAGL QSTYTDYPATVALFTSGKAAMMINGVWEVPTMTDLAKQGKLFDWGAVEIPVIFDKPCTYADSHSFAIPKNKGKEISPEKR AAVLEVISWIDKHSLFWATAGHIPAYKPVTETAEYKAMQPNATYSTLTANMIFDPKSTKAGVAGPIFDIMSNYFVPTLNG EMDPGEAVKSIKEELNSM
Sequences:
>Translated_418_residues MAIAVVAAGGFWAVAAQAEETVAWWDFLGGGDGVRMKQMISDFNAAHVGKIKIDATTLEWGTPFYAKVQTSAAVGEAPDV MTYHASRIPLAVSQDLLEEITADDMSKMGLSASDFAQTTMGAVTVDGKQYAVPLDTHPIVLYYNRVLLKKAGVLGDDGRP VGMKNKEEFTATLQKLKDAGVEFPLGSVTADGNFMYRTIYSLVCQQGGELLTGNEFLAGDNGKKLANALAVLQGWTKAGL QSTYTDYPATVALFTSGKAAMMINGVWEVPTMTDLAKQGKLFDWGAVEIPVIFDKPCTYADSHSFAIPKNKGKEISPEKR AAVLEVISWIDKHSLFWATAGHIPAYKPVTETAEYKAMQPNATYSTLTANMIFDPKSTKAGVAGPIFDIMSNYFVPTLNG EMDPGEAVKSIKEELNSM >Mature_417_residues AIAVVAAGGFWAVAAQAEETVAWWDFLGGGDGVRMKQMISDFNAAHVGKIKIDATTLEWGTPFYAKVQTSAAVGEAPDVM TYHASRIPLAVSQDLLEEITADDMSKMGLSASDFAQTTMGAVTVDGKQYAVPLDTHPIVLYYNRVLLKKAGVLGDDGRPV GMKNKEEFTATLQKLKDAGVEFPLGSVTADGNFMYRTIYSLVCQQGGELLTGNEFLAGDNGKKLANALAVLQGWTKAGLQ STYTDYPATVALFTSGKAAMMINGVWEVPTMTDLAKQGKLFDWGAVEIPVIFDKPCTYADSHSFAIPKNKGKEISPEKRA AVLEVISWIDKHSLFWATAGHIPAYKPVTETAEYKAMQPNATYSTLTANMIFDPKSTKAGVAGPIFDIMSNYFVPTLNGE MDPGEAVKSIKEELNSM
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45090; Mature: 44959
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAVVAAGGFWAVAAQAEETVAWWDFLGGGDGVRMKQMISDFNAAHVGKIKIDATTLEW CEEEEEECCCEEEEECCCCHHEEEEHHCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEEEC GTPFYAKVQTSAAVGEAPDVMTYHASRIPLAVSQDLLEEITADDMSKMGLSASDFAQTTM CCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GAVTVDGKQYAVPLDTHPIVLYYNRVLLKKAGVLGDDGRPVGMKNKEEFTATLQKLKDAG CEEEECCCEEEEECCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC VEFPLGSVTADGNFMYRTIYSLVCQQGGELLTGNEFLAGDNGKKLANALAVLQGWTKAGL CCCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHHHHHHHCC QSTYTDYPATVALFTSGKAAMMINGVWEVPTMTDLAKQGKLFDWGAVEIPVIFDKPCTYA CCCCCCCCEEEEEEECCCEEEEEECEECCCCHHHHHHCCCEEECCCEEEEEEECCCCCCC DSHSFAIPKNKGKEISPEKRAAVLEVISWIDKHSLFWATAGHIPAYKPVTETAEYKAMQP CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHEECCC NATYSTLTANMIFDPKSTKAGVAGPIFDIMSNYFVPTLNGEMDPGEAVKSIKEELNSM CCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AIAVVAAGGFWAVAAQAEETVAWWDFLGGGDGVRMKQMISDFNAAHVGKIKIDATTLEW EEEEEECCCEEEEECCCCHHEEEEHHCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEEEC GTPFYAKVQTSAAVGEAPDVMTYHASRIPLAVSQDLLEEITADDMSKMGLSASDFAQTTM CCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC GAVTVDGKQYAVPLDTHPIVLYYNRVLLKKAGVLGDDGRPVGMKNKEEFTATLQKLKDAG CEEEECCCEEEEECCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC VEFPLGSVTADGNFMYRTIYSLVCQQGGELLTGNEFLAGDNGKKLANALAVLQGWTKAGL CCCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHHHHHHHCC QSTYTDYPATVALFTSGKAAMMINGVWEVPTMTDLAKQGKLFDWGAVEIPVIFDKPCTYA CCCCCCCCEEEEEEECCCEEEEEECEECCCCHHHHHHCCCEEECCCEEEEEEECCCCCCC DSHSFAIPKNKGKEISPEKRAAVLEVISWIDKHSLFWATAGHIPAYKPVTETAEYKAMQP CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHEECCC NATYSTLTANMIFDPKSTKAGVAGPIFDIMSNYFVPTLNGEMDPGEAVKSIKEELNSM CCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA