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The map label for this gene is araP [H]

Identifier: 13473098

GI number: 13473098

Start: 2892911

End: 2893813

Strand: Reverse

Name: araP [H]

Synonym: mll3589

Alternate gene names: 13473098

Gene position: 2893813-2892911 (Counterclockwise)

Preceding gene: 13473099

Following gene: 13473097

Centisome position: 41.13

GC content: 61.57

Gene sequence:

>903_bases
GTGTTTCGAGGAAGAGCCATGCTTCGCAACTCCCGCACTGAACGTCTTGTCGCACTGGTGCTGGTCGCTCCCTTCCTGGC
GATCTACCTGCTGGCGTTTGTCTATCCGACAGTTCAGATGTTTCGCATCTCCTTCACCGATGCGCCGCTGATCGGCGCGG
GGCGGTGGGTTGGCCTCGACAACTACCTGCGGCTCGACAACGACCCGATGTTCCGGCGCGCGGTCTGGAACACCGCGTAC
TTCGTGCTGATGACAGTCGTCCCCGGGACGCTCATCGCCCTGTTGATCTCGCTTGGCGTTTCACGCCTCCAGGGCCGGTT
CCAGGCGATCGTGCTGGCGCTGTTCTTCCTGCCCTATATCCTGCCGGTGTCGGTCGTCTATCTGATCTGGGACTGGACGC
TGAATTTCCAGTTCGGGATCGCCATGCACGTGCTGGACTGGCTGGGAATCCCGCGCGTACCTGTCTTCAAGTCGCGCGTC
TGGTTCTTGCCGGCGGTCGCCGGGGTGACGATCTGGTGGACCGCGGGCTTCTCGATCCTGCTCTTCCTCGCCGGACTGCG
GTCCATACCAGCGGAAATCTACGAAGCCGCCGCACTCGACAACTCGACGCGATGGACGACGTTCCGGCGTATCACCTGGC
CGCTGCTATGGCCGATCACCTCGCTGGTATTCACCATCCAGCTCATCCTACAGCTCAAGATCTTCGATCAGGTCTATCTG
TTCTCGATCGGCGGCCGGCCCAACGACAATATGGTGCTCGTCTATTACATCTTCCAGAAGGCCTTCCAGCAGAACCAGGG
CGGCAGGGCGGCGGCTGTCGCCGTCACCCTCTTCGTGCTCGTGGTGGTCGTCTCGGTCCTGCAATTCCAACTGCTCCGGT
TCGCCGAAAGGCGGCGCCGATGA

Upstream 100 bases:

>100_bases
GCGAGATGGACCCGGGCGAGGCGGTGAAATCCATCAAGGAAGAGTTGAACAGCATGTAAGGCTCAAGGCTGGGGCCGTCC
TGCCCAGGGCAGCCCCGGCC

Downstream 100 bases:

>100_bases
ACGCCGTGGCTGCGCAACGCTGGAACTTCTGGGGCGGGATCATCACGGCACTGACGCTCGTCTGGGCCATCCTATGGGCG
TTCCCGCTCTATTGGGGTGT

Product: sugar transporter integral membrane protein (permease)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MFRGRAMLRNSRTERLVALVLVAPFLAIYLLAFVYPTVQMFRISFTDAPLIGAGRWVGLDNYLRLDNDPMFRRAVWNTAY
FVLMTVVPGTLIALLISLGVSRLQGRFQAIVLALFFLPYILPVSVVYLIWDWTLNFQFGIAMHVLDWLGIPRVPVFKSRV
WFLPAVAGVTIWWTAGFSILLFLAGLRSIPAEIYEAAALDNSTRWTTFRRITWPLLWPITSLVFTIQLILQLKIFDQVYL
FSIGGRPNDNMVLVYYIFQKAFQQNQGGRAAAVAVTLFVLVVVVSVLQFQLLRFAERRRR

Sequences:

>Translated_300_residues
MFRGRAMLRNSRTERLVALVLVAPFLAIYLLAFVYPTVQMFRISFTDAPLIGAGRWVGLDNYLRLDNDPMFRRAVWNTAY
FVLMTVVPGTLIALLISLGVSRLQGRFQAIVLALFFLPYILPVSVVYLIWDWTLNFQFGIAMHVLDWLGIPRVPVFKSRV
WFLPAVAGVTIWWTAGFSILLFLAGLRSIPAEIYEAAALDNSTRWTTFRRITWPLLWPITSLVFTIQLILQLKIFDQVYL
FSIGGRPNDNMVLVYYIFQKAFQQNQGGRAAAVAVTLFVLVVVVSVLQFQLLRFAERRRR
>Mature_300_residues
MFRGRAMLRNSRTERLVALVLVAPFLAIYLLAFVYPTVQMFRISFTDAPLIGAGRWVGLDNYLRLDNDPMFRRAVWNTAY
FVLMTVVPGTLIALLISLGVSRLQGRFQAIVLALFFLPYILPVSVVYLIWDWTLNFQFGIAMHVLDWLGIPRVPVFKSRV
WFLPAVAGVTIWWTAGFSILLFLAGLRSIPAEIYEAAALDNSTRWTTFRRITWPLLWPITSLVFTIQLILQLKIFDQVYL
FSIGGRPNDNMVLVYYIFQKAFQQNQGGRAAAVAVTLFVLVVVVSVLQFQLLRFAERRRR

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=262, Percent_Identity=28.6259541984733, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=27.9310344827586, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34449; Mature: 34449

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRGRAMLRNSRTERLVALVLVAPFLAIYLLAFVYPTVQMFRISFTDAPLIGAGRWVGLD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCEECCC
NYLRLDNDPMFRRAVWNTAYFVLMTVVPGTLIALLISLGVSRLQGRFQAIVLALFFLPYI
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPVSVVYLIWDWTLNFQFGIAMHVLDWLGIPRVPVFKSRVWFLPAVAGVTIWWTAGFSIL
HHHHHHHHHHHHEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLAGLRSIPAEIYEAAALDNSTRWTTFRRITWPLLWPITSLVFTIQLILQLKIFDQVYL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
FSIGGRPNDNMVLVYYIFQKAFQQNQGGRAAAVAVTLFVLVVVVSVLQFQLLRFAERRRR
EEECCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRGRAMLRNSRTERLVALVLVAPFLAIYLLAFVYPTVQMFRISFTDAPLIGAGRWVGLD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEECCCCEECCC
NYLRLDNDPMFRRAVWNTAYFVLMTVVPGTLIALLISLGVSRLQGRFQAIVLALFFLPYI
CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPVSVVYLIWDWTLNFQFGIAMHVLDWLGIPRVPVFKSRVWFLPAVAGVTIWWTAGFSIL
HHHHHHHHHHHHEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLAGLRSIPAEIYEAAALDNSTRWTTFRRITWPLLWPITSLVFTIQLILQLKIFDQVYL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
FSIGGRPNDNMVLVYYIFQKAFQQNQGGRAAAVAVTLFVLVVVVSVLQFQLLRFAERRRR
EEECCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]