| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is aroK
Identifier: 13473083
GI number: 13473083
Start: 2879337
End: 2879948
Strand: Reverse
Name: aroK
Synonym: mll3573
Alternate gene names: 13473083
Gene position: 2879948-2879337 (Counterclockwise)
Preceding gene: 13473089
Following gene: 13473082
Centisome position: 40.93
GC content: 65.85
Gene sequence:
>612_bases ATGAACGCGCACCAGGCAAATCCCCCAGGCGAGAGCCTCGCCGCGCTGCTTGGCCGGCTGGGCAGCCGGTCCATCGTCTT TGTCGGCCTGATGGGCGCCGGCAAGACGGCGATCGGGCGCAAGGTGGCGACGATGCTTTCGCTGCCTTTCATCGACAGCG ACCAGGAGATCGAGAGCGTCTCGCGCATGACCGTGCCGGAGCTGTTCGAGCGCTATGGCGAGGCCGAGTTCAGGGCCCTG GAGCAGCGCGTCATCCTGCGCGTGCTGGAAAATGGCCCGCAGGTGCTGTCGACCGGCGGCGGCGCCTTCATGAACGCGCA GACGCGCGAGGCCATCGCCGGCCATGGCGTGTCGGTGTGGCTGAAGGCCGAGCTCGACCTTCTGATGGACCGGGTCTCGA AGAAGCAGAACCGGCCGCTGTTGAAGAGTGCCGATCCTCGCGCCGTGCTGGAGCGGCTGATGAGCGAGCGGTATCCGGTC TACGCGACATCGGATGTCACCGTGCCGACCCGCGACGACCGCAAGGAAGTCATCGCTGCCGAGGTGCTGAATGCGCTGTG CCGGCATTTCGGCATCGATGAAATTGCAGCGACGGGCGAGATCGAATCGTGA
Upstream 100 bases:
>100_bases GCATCCTCCACCCGATATAGGCTTGCCTATGCTCGGCACGCTTGACGCAAACCGGCTTTTCATGTCGATACGCCGGCAAA GAGGGCCCAAGAAACAGCTG
Downstream 100 bases:
>100_bases GCGCGGACCAGCCAGTCACCGTCGAAGTCGGCCTTGGCGACCGGGCCTACGACATATTGATCGGCTCCGGCCTTTTGTCG CGCGCCGGCGAAGAGATTTC
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MNAHQANPPGESLAALLGRLGSRSIVFVGLMGAGKTAIGRKVATMLSLPFIDSDQEIESVSRMTVPELFERYGEAEFRAL EQRVILRVLENGPQVLSTGGGAFMNAQTREAIAGHGVSVWLKAELDLLMDRVSKKQNRPLLKSADPRAVLERLMSERYPV YATSDVTVPTRDDRKEVIAAEVLNALCRHFGIDEIAATGEIES
Sequences:
>Translated_203_residues MNAHQANPPGESLAALLGRLGSRSIVFVGLMGAGKTAIGRKVATMLSLPFIDSDQEIESVSRMTVPELFERYGEAEFRAL EQRVILRVLENGPQVLSTGGGAFMNAQTREAIAGHGVSVWLKAELDLLMDRVSKKQNRPLLKSADPRAVLERLMSERYPV YATSDVTVPTRDDRKEVIAAEVLNALCRHFGIDEIAATGEIES >Mature_203_residues MNAHQANPPGESLAALLGRLGSRSIVFVGLMGAGKTAIGRKVATMLSLPFIDSDQEIESVSRMTVPELFERYGEAEFRAL EQRVILRVLENGPQVLSTGGGAFMNAQTREAIAGHGVSVWLKAELDLLMDRVSKKQNRPLLKSADPRAVLERLMSERYPV YATSDVTVPTRDDRKEVIAAEVLNALCRHFGIDEIAATGEIES
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=167, Percent_Identity=40.1197604790419, Blast_Score=117, Evalue=4e-28, Organism=Escherichia coli, GI1786587, Length=171, Percent_Identity=28.0701754385965, Blast_Score=67, Evalue=7e-13,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_RHILO (Q98FY0)
Other databases:
- EMBL: BA000012 - RefSeq: NP_104650.1 - ProteinModelPortal: Q98FY0 - SMR: Q98FY0 - GeneID: 1227311 - GenomeReviews: BA000012_GR - KEGG: mlo:mll3573 - NMPDR: fig|266835.1.peg.2754 - HOGENOM: HBG335815 - OMA: VIYLRAN - BRENDA: 2.7.1.71 - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 22162; Mature: 22162
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS01128 SHIKIMATE_KINASE; PS00267 TACHYKININ
Important sites: BINDING 54-54 BINDING 78-78 BINDING 100-100 BINDING 138-138 BINDING 157-157
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHQANPPGESLAALLGRLGSRSIVFVGLMGAGKTAIGRKVATMLSLPFIDSDQEIESV CCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHH SRMTVPELFERYGEAEFRALEQRVILRVLENGPQVLSTGGGAFMNAQTREAIAGHGVSVW HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCHHHHHHHCCCEEEE LKAELDLLMDRVSKKQNRPLLKSADPRAVLERLMSERYPVYATSDVTVPTRDDRKEVIAA EHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHH EVLNALCRHFGIDEIAATGEIES HHHHHHHHHCCHHHHHCCCCCCC >Mature Secondary Structure MNAHQANPPGESLAALLGRLGSRSIVFVGLMGAGKTAIGRKVATMLSLPFIDSDQEIESV CCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHH SRMTVPELFERYGEAEFRALEQRVILRVLENGPQVLSTGGGAFMNAQTREAIAGHGVSVW HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCHHHHHHHCCCEEEE LKAELDLLMDRVSKKQNRPLLKSADPRAVLERLMSERYPVYATSDVTVPTRDDRKEVIAA EHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHH EVLNALCRHFGIDEIAATGEIES HHHHHHHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968