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The map label for this gene is yjiA [H]

Identifier: 13473089

GI number: 13473089

Start: 2884141

End: 2885268

Strand: Reverse

Name: yjiA [H]

Synonym: mll3580

Alternate gene names: 13473089

Gene position: 2885268-2884141 (Counterclockwise)

Preceding gene: 13473090

Following gene: 13473083

Centisome position: 41.01

GC content: 65.07

Gene sequence:

>1128_bases
ATGAATGGGTTCCCGATTCCCGTCTCGGTGCTGACCGGCTTCCTCGGCGCTGGCAAGACCACGCTGCTCAATCGGCTGCT
GAAAGACCCGGTGCTGGCCGACACCGCGGTCATCATCAACGAGTATGGCGAGGTGGCGATCGACCATCTGCTGGTCGAGC
AGGCTTCCGACGGCATCATCCAGCTTTCCGACGGCTGCCTGTGCTGCACCGTGCGCGGCGAACTGGTCGACACGCTGGCC
GATCTGGTCGACCGGCTGCAGACCGGCCGTATCGCCCGTCTCGCCCGCGTCATCGTCGAGACCACGGGGCTGGCCGACCC
GGCGCCGGTGCTGCAGTCGATCATGGCGCATCCGGCGCTTGTCCAGGCTTTTCGGCTCGACGGCGTCATCGCGCTGGTCG
ATGCGGTCAATGGCAATGCCACGCTCGACGCTCATGTCGAGGCAGTCAAGCAGGTCGCCGTCGCCGACCGCATCGTGCTG
AGCAAGGTCGACCTGGTGACCGATACCGGCGATCTCGACACGCTGCGGGCGCGCCTGCGGCAGATCAATCCGGGCGCCGA
ACTGCTTGATGCCGGCCATTTAACAACCGGCGTGGCGGCGCTGTTTGATTGCGGCCTCTACAACCCCGCCACCAAATCCG
CCGATGTGCGCCGCTGGCTCGGCGAGGAAGCGGCGCACGACCATGCCCACGGCCATCACCATGACGGTCATGACCACGGG
CATGACCACGATCACAGTCATGATCATGGCCATCGCCACGATTCCCGCGTGCGCTCCTATTCGCTGGTCCATGACGGTCC
GGTGCCGTTTTCAGCGATAGAAATGTTCCTCGACCTGTTGCGTTCGACGCATGGCGAGAAGCTGCTGCGCATGAAGGGCG
TGATCGAACTCAGCGAAGATCCGTCACGCCCGCTGGTCATCCACGGCGTGCAGAAGATCCTGCATCCGCCGGCAAGGCTG
CCCGCCTGGCCGGACGGCCAGCGCGGCACGCGGCTGGTGCTGATCACGCTCGATATGCCGGAAGACTATGTGCGCCGGCT
GTTCGCCGCCTTCACCAACCGGCCGTCGATCGACACACCCGACCGCGCGGCATTGGAAAACAACCCGCTGGCGATTGCCG
GACGATAG

Upstream 100 bases:

>100_bases
TCGCGAACTAGAGCATGATCCCGAACCGAAGGTCCGCGTCAGCGAAACTTGGAATCCGGTTTTCGGAAAAGATCATGCTC
AAACAAAGAGACAGAGCCCG

Downstream 100 bases:

>100_bases
CGTTTTGCATCGAAATTCAGACGGTCTCGCCGCGCTCGACCAGGAACCGGTGGCCGCCTGATACCGCCGCTGTTTCAACC
AGCTGGTGGCCGGCATCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MNGFPIPVSVLTGFLGAGKTTLLNRLLKDPVLADTAVIINEYGEVAIDHLLVEQASDGIIQLSDGCLCCTVRGELVDTLA
DLVDRLQTGRIARLARVIVETTGLADPAPVLQSIMAHPALVQAFRLDGVIALVDAVNGNATLDAHVEAVKQVAVADRIVL
SKVDLVTDTGDLDTLRARLRQINPGAELLDAGHLTTGVAALFDCGLYNPATKSADVRRWLGEEAAHDHAHGHHHDGHDHG
HDHDHSHDHGHRHDSRVRSYSLVHDGPVPFSAIEMFLDLLRSTHGEKLLRMKGVIELSEDPSRPLVIHGVQKILHPPARL
PAWPDGQRGTRLVLITLDMPEDYVRRLFAAFTNRPSIDTPDRAALENNPLAIAGR

Sequences:

>Translated_375_residues
MNGFPIPVSVLTGFLGAGKTTLLNRLLKDPVLADTAVIINEYGEVAIDHLLVEQASDGIIQLSDGCLCCTVRGELVDTLA
DLVDRLQTGRIARLARVIVETTGLADPAPVLQSIMAHPALVQAFRLDGVIALVDAVNGNATLDAHVEAVKQVAVADRIVL
SKVDLVTDTGDLDTLRARLRQINPGAELLDAGHLTTGVAALFDCGLYNPATKSADVRRWLGEEAAHDHAHGHHHDGHDHG
HDHDHSHDHGHRHDSRVRSYSLVHDGPVPFSAIEMFLDLLRSTHGEKLLRMKGVIELSEDPSRPLVIHGVQKILHPPARL
PAWPDGQRGTRLVLITLDMPEDYVRRLFAAFTNRPSIDTPDRAALENNPLAIAGR
>Mature_375_residues
MNGFPIPVSVLTGFLGAGKTTLLNRLLKDPVLADTAVIINEYGEVAIDHLLVEQASDGIIQLSDGCLCCTVRGELVDTLA
DLVDRLQTGRIARLARVIVETTGLADPAPVLQSIMAHPALVQAFRLDGVIALVDAVNGNATLDAHVEAVKQVAVADRIVL
SKVDLVTDTGDLDTLRARLRQINPGAELLDAGHLTTGVAALFDCGLYNPATKSADVRRWLGEEAAHDHAHGHHHDGHDHG
HDHDHSHDHGHRHDSRVRSYSLVHDGPVPFSAIEMFLDLLRSTHGEKLLRMKGVIELSEDPSRPLVIHGVQKILHPPARL
PAWPDGQRGTRLVLITLDMPEDYVRRLFAAFTNRPSIDTPDRAALENNPLAIAGR

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=368, Percent_Identity=27.445652173913, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI126722884, Length=368, Percent_Identity=27.1739130434783, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI146231952, Length=368, Percent_Identity=27.7173913043478, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI148727351, Length=368, Percent_Identity=27.445652173913, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI223941779, Length=368, Percent_Identity=27.445652173913, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI223941776, Length=368, Percent_Identity=25.8152173913043, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI119120938, Length=141, Percent_Identity=36.8794326241135, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI87082430, Length=347, Percent_Identity=34.2939481268012, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1788499, Length=163, Percent_Identity=32.5153374233129, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324356, Length=249, Percent_Identity=28.5140562248996, Blast_Score=105, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40710; Mature: 40710

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFPIPVSVLTGFLGAGKTTLLNRLLKDPVLADTAVIINEYGEVAIDHLLVEQASDGII
CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
QLSDGCLCCTVRGELVDTLADLVDRLQTGRIARLARVIVETTGLADPAPVLQSIMAHPAL
EECCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHH
VQAFRLDGVIALVDAVNGNATLDAHVEAVKQVAVADRIVLSKVDLVTDTGDLDTLRARLR
HHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
QINPGAELLDAGHLTTGVAALFDCGLYNPATKSADVRRWLGEEAAHDHAHGHHHDGHDHG
HCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
HDHDHSHDHGHRHDSRVRSYSLVHDGPVPFSAIEMFLDLLRSTHGEKLLRMKGVIELSED
CCCCCCCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCEEECCC
PSRPLVIHGVQKILHPPARLPAWPDGQRGTRLVLITLDMPEDYVRRLFAAFTNRPSIDTP
CCCCEEHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCC
DRAALENNPLAIAGR
CHHHHCCCCEEEECC
>Mature Secondary Structure
MNGFPIPVSVLTGFLGAGKTTLLNRLLKDPVLADTAVIINEYGEVAIDHLLVEQASDGII
CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
QLSDGCLCCTVRGELVDTLADLVDRLQTGRIARLARVIVETTGLADPAPVLQSIMAHPAL
EECCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHH
VQAFRLDGVIALVDAVNGNATLDAHVEAVKQVAVADRIVLSKVDLVTDTGDLDTLRARLR
HHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
QINPGAELLDAGHLTTGVAALFDCGLYNPATKSADVRRWLGEEAAHDHAHGHHHDGHDHG
HCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
HDHDHSHDHGHRHDSRVRSYSLVHDGPVPFSAIEMFLDLLRSTHGEKLLRMKGVIELSED
CCCCCCCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCEEECCC
PSRPLVIHGVQKILHPPARLPAWPDGQRGTRLVLITLDMPEDYVRRLFAAFTNRPSIDTP
CCCCEEHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCC
DRAALENNPLAIAGR
CHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]