| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473060
Identifier: 13473060
GI number: 13473060
Start: 2859461
End: 2860249
Strand: Reverse
Name: 13473060
Synonym: mll3545
Alternate gene names: NA
Gene position: 2860249-2859461 (Counterclockwise)
Preceding gene: 13473063
Following gene: 13473059
Centisome position: 40.65
GC content: 66.67
Gene sequence:
>789_bases ATGCATTCCGACATCGTCGACCTTCGCTCCTTCTATTCGACAACGCTTGGCCGGTTCGCCGAGCGTTCGATCACCATGGC GCTGTCGTCGATATGGGCGGCTGTCCCCAATGAACGGCTGGTCGGGCTTGGCTATACCTTGCCCTGGCTGGAGCGTTTCG GCTCCGATGCCGAGCGGGTCTTTGCCTTCATGCCGGCAACGCAGGGCGCGGTGGTCTGGCCGGCAACCGGGCCGACGGCG ACAGCTTTGGTCTTCGACGAGGAACTGCCGCTTGTCGATTCCTGCATCGACCGCATGCTGCTCGTCCACTCGCTCGAACA TGTCGAAAACCCACGCGAGACGCTCAACGAGATCTGGCGGGTGTTGTCGCCCGCCGGGCGCGTTGTCATCGTCGTGCCCA ACCGGCGCGGTGTCTGGGCGCGGTTCGAGCATACACCGTTCGGCAATGGCCGGCCGTTCTCGCGTGGCCAGCTGACGGAA CTGCTGCGCGAGGCGAATTTCACGCCTGCCGCCTGGTCGGATGCGCTGTTCTTCCCGCCATCGCGGCGGCGCTTCATGAT GCGTTTCCACAATGTGCTGGAGCGCGCCGGCCGGCGGCTGTGGCCGATCTTTTCCGGCGTCATCGTCGTCGAGGCGCAGA AGCGGCTCTATCAGGGCGTGCCGGTCGCCCAGCGTGCCTCCCGCCGCGTCTTCGTGCCGGTGCTGTCGCCACACGGCGCG ACGCGGCTCGGCCGCCGGGCCGAGGCCGGAGGCCCATTGGCGCCGGCTCGTCAGGTGAAACCTTCGTGA
Upstream 100 bases:
>100_bases ACCGAATGTCATTCCCGGGGAGGACAAATGTCATCGCAATGTGCCAGCCGCCTCAGGGCCCTTTGTTGAAACCGGCCGAT ATCACGGCTACATCCCTGAC
Downstream 100 bases:
>100_bases TCGTGCTAGAAACGCGCGCGGCGCGTCCCTCCTCGACCTATCTGTCGTGGTGAACTCGCAACCTGCCTGATATGCGGATG CCGTCATCATCCGGTCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MHSDIVDLRSFYSTTLGRFAERSITMALSSIWAAVPNERLVGLGYTLPWLERFGSDAERVFAFMPATQGAVVWPATGPTA TALVFDEELPLVDSCIDRMLLVHSLEHVENPRETLNEIWRVLSPAGRVVIVVPNRRGVWARFEHTPFGNGRPFSRGQLTE LLREANFTPAAWSDALFFPPSRRRFMMRFHNVLERAGRRLWPIFSGVIVVEAQKRLYQGVPVAQRASRRVFVPVLSPHGA TRLGRRAEAGGPLAPARQVKPS
Sequences:
>Translated_262_residues MHSDIVDLRSFYSTTLGRFAERSITMALSSIWAAVPNERLVGLGYTLPWLERFGSDAERVFAFMPATQGAVVWPATGPTA TALVFDEELPLVDSCIDRMLLVHSLEHVENPRETLNEIWRVLSPAGRVVIVVPNRRGVWARFEHTPFGNGRPFSRGQLTE LLREANFTPAAWSDALFFPPSRRRFMMRFHNVLERAGRRLWPIFSGVIVVEAQKRLYQGVPVAQRASRRVFVPVLSPHGA TRLGRRAEAGGPLAPARQVKPS >Mature_262_residues MHSDIVDLRSFYSTTLGRFAERSITMALSSIWAAVPNERLVGLGYTLPWLERFGSDAERVFAFMPATQGAVVWPATGPTA TALVFDEELPLVDSCIDRMLLVHSLEHVENPRETLNEIWRVLSPAGRVVIVVPNRRGVWARFEHTPFGNGRPFSRGQLTE LLREANFTPAAWSDALFFPPSRRRFMMRFHNVLERAGRRLWPIFSGVIVVEAQKRLYQGVPVAQRASRRVFVPVLSPHGA TRLGRRAEAGGPLAPARQVKPS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 29437; Mature: 29437
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSDIVDLRSFYSTTLGRFAERSITMALSSIWAAVPNERLVGLGYTLPWLERFGSDAERV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCHHHH FAFMPATQGAVVWPATGPTATALVFDEELPLVDSCIDRMLLVHSLEHVENPRETLNEIWR EEECCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VLSPAGRVVIVVPNRRGVWARFEHTPFGNGRPFSRGQLTELLREANFTPAAWSDALFFPP HHCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCC SRRRFMMRFHNVLERAGRRLWPIFSGVIVVEAQKRLYQGVPVAQRASRRVFVPVLSPHGA HHHHHHHHHHHHHHHCCCCHHHHHHCEEEEEEHHHHHCCCCHHHHCCCEEEEEEECCCCH TRLGRRAEAGGPLAPARQVKPS HHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHSDIVDLRSFYSTTLGRFAERSITMALSSIWAAVPNERLVGLGYTLPWLERFGSDAERV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCHHHH FAFMPATQGAVVWPATGPTATALVFDEELPLVDSCIDRMLLVHSLEHVENPRETLNEIWR EEECCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VLSPAGRVVIVVPNRRGVWARFEHTPFGNGRPFSRGQLTELLREANFTPAAWSDALFFPP HHCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCC SRRRFMMRFHNVLERAGRRLWPIFSGVIVVEAQKRLYQGVPVAQRASRRVFVPVLSPHGA HHHHHHHHHHHHHHHCCCCHHHHHHCEEEEEEHHHHHCCCCHHHHCCCEEEEEEECCCCH TRLGRRAEAGGPLAPARQVKPS HHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6209404 [H]