| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is tyrC [H]
Identifier: 13473052
GI number: 13473052
Start: 2851445
End: 2852380
Strand: Reverse
Name: tyrC [H]
Synonym: mll3535
Alternate gene names: 13473052
Gene position: 2852380-2851445 (Counterclockwise)
Preceding gene: 13473053
Following gene: 13473049
Centisome position: 40.54
GC content: 63.35
Gene sequence:
>936_bases ATGACATCACCGATGTTTGAAAAGATCGCGCTGGTCGGCATCGGCCTGATCGGCTCGTCGCTGGCCCGCGTCATCCGACG CGAGGGGCTTGCTGGCCACGTTGCCATCTCGACCCGCAGCGCCACGACGCTGAAGCGGGCGGAGGAGCTTGGGCTGGGCG ATTCCTACACGACCGATGCGAAGGAAGCGGTCCGCGATGCCGATCTGGTCATCGTCTCCGTGCCGGTCGGCTCGTCCGGT GCGGTGGCCGAGGAGATCGCACCGGCGCTGAAGAAAGGTGCGATCCTCACCGATGTCGGCTCGACCAAGGCCTCCGTCAT CGCGCAGATGCAGCCGCACGTGCCTGATGGCGTTCATTTCATTCCCGGCCATCCGCTGGCGGGCACGGAAAAATCCGGAC CGGATGCCGGTTTCGCCGATCTGTTCGACAATCGCTGGTGTATCTTCACGCCGTTACCGGGCACCGATCCGGAGGCACTT GAGAGGCTGTCGGAATTCTGGCGCCGTTGCGGCGCCAACATCGACACGATGGATCCGCAGCATCACGACATGACGCTCGC CATCGTCTCGCATCTGCCGCACATCATCGCCTACAACATCGTCGGCACCGCCGACGATCTGGAATCGGTGACCAAGACGG AAGTCATCAAATATTCCGCCTCCGGCTTTCGCGACTTCACGCGTCTGGCCGCCTCCGATCCGACCATGTGGCGGGATGTC TGCCTGCACAACAAGGACGCCATTCTCGAAATGCTGGCGCGGTTCTCGGAAGATCTGGCGTTCCTGCAGCGAGCGATCCG CTGGGGCGACGGCGACAAATTGTTCGACCTGTTCACCCGCACCCGCGCCGTGCGCCGCTCGATCATCGAGGCCGGCCAGG ATATCGACGTGCCCGATTTCGGCCGCCAGGCGGTCGAACACCCGTCGAAGAACTAG
Upstream 100 bases:
>100_bases CGCTGCGCATGACCGTCGGCACGGAAGAGGCCAATCGCGGCGTCGTCGCCGCGCTCACGACATTCCTGAAAAGCTAGAGC GCCCGAAAAGCAGGAACACC
Downstream 100 bases:
>100_bases GCTGTTTCGGGCCAGGTCGCCGTGACCATCGCCAGCGTCTCGGCCCGGTCCGGCGCGCCGAGCCTGCCGCCGAAGCGCAG GCATTTGAGCGCGGCGGCGG
Product: cyclohexadienyl dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MTSPMFEKIALVGIGLIGSSLARVIRREGLAGHVAISTRSATTLKRAEELGLGDSYTTDAKEAVRDADLVIVSVPVGSSG AVAEEIAPALKKGAILTDVGSTKASVIAQMQPHVPDGVHFIPGHPLAGTEKSGPDAGFADLFDNRWCIFTPLPGTDPEAL ERLSEFWRRCGANIDTMDPQHHDMTLAIVSHLPHIIAYNIVGTADDLESVTKTEVIKYSASGFRDFTRLAASDPTMWRDV CLHNKDAILEMLARFSEDLAFLQRAIRWGDGDKLFDLFTRTRAVRRSIIEAGQDIDVPDFGRQAVEHPSKN
Sequences:
>Translated_311_residues MTSPMFEKIALVGIGLIGSSLARVIRREGLAGHVAISTRSATTLKRAEELGLGDSYTTDAKEAVRDADLVIVSVPVGSSG AVAEEIAPALKKGAILTDVGSTKASVIAQMQPHVPDGVHFIPGHPLAGTEKSGPDAGFADLFDNRWCIFTPLPGTDPEAL ERLSEFWRRCGANIDTMDPQHHDMTLAIVSHLPHIIAYNIVGTADDLESVTKTEVIKYSASGFRDFTRLAASDPTMWRDV CLHNKDAILEMLARFSEDLAFLQRAIRWGDGDKLFDLFTRTRAVRRSIIEAGQDIDVPDFGRQAVEHPSKN >Mature_310_residues TSPMFEKIALVGIGLIGSSLARVIRREGLAGHVAISTRSATTLKRAEELGLGDSYTTDAKEAVRDADLVIVSVPVGSSGA VAEEIAPALKKGAILTDVGSTKASVIAQMQPHVPDGVHFIPGHPLAGTEKSGPDAGFADLFDNRWCIFTPLPGTDPEALE RLSEFWRRCGANIDTMDPQHHDMTLAIVSHLPHIIAYNIVGTADDLESVTKTEVIKYSASGFRDFTRLAASDPTMWRDVC LHNKDAILEMLARFSEDLAFLQRAIRWGDGDKLFDLFTRTRAVRRSIIEAGQDIDVPDFGRQAVEHPSKN
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 33814; Mature: 33683
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPMFEKIALVGIGLIGSSLARVIRREGLAGHVAISTRSATTLKRAEELGLGDSYTTDA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCH KEAVRDADLVIVSVPVGSSGAVAEEIAPALKKGAILTDVGSTKASVIAQMQPHVPDGVHF HHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCEE IPGHPLAGTEKSGPDAGFADLFDNRWCIFTPLPGTDPEALERLSEFWRRCGANIDTMDPQ CCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC HHDMTLAIVSHLPHIIAYNIVGTADDLESVTKTEVIKYSASGFRDFTRLAASDPTMWRDV CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHH CLHNKDAILEMLARFSEDLAFLQRAIRWGDGDKLFDLFTRTRAVRRSIIEAGQDIDVPDF HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GRQAVEHPSKN CHHHHCCCCCC >Mature Secondary Structure TSPMFEKIALVGIGLIGSSLARVIRREGLAGHVAISTRSATTLKRAEELGLGDSYTTDA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCH KEAVRDADLVIVSVPVGSSGAVAEEIAPALKKGAILTDVGSTKASVIAQMQPHVPDGVHF HHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCEE IPGHPLAGTEKSGPDAGFADLFDNRWCIFTPLPGTDPEALERLSEFWRRCGANIDTMDPQ CCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC HHDMTLAIVSHLPHIIAYNIVGTADDLESVTKTEVIKYSASGFRDFTRLAASDPTMWRDV CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHH CLHNKDAILEMLARFSEDLAFLQRAIRWGDGDKLFDLFTRTRAVRRSIIEAGQDIDVPDF HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GRQAVEHPSKN CHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]