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The map label for this gene is etfB [H]

Identifier: 13473012

GI number: 13473012

Start: 2811664

End: 2812413

Strand: Direct

Name: etfB [H]

Synonym: mlr3487

Alternate gene names: 13473012

Gene position: 2811664-2812413 (Clockwise)

Preceding gene: 13473011

Following gene: 13473013

Centisome position: 39.96

GC content: 63.87

Gene sequence:

>750_bases
ATGAAGATCCTTGTGCCCGTGAAGCGGGTTGTGGATGCGAACGTCAAGGTTCGCGTGAAGGCCGACGGTTCGGCGGTGGA
ACTCGCCAACGTCAAGATGGCGATGAACCCGTTCGACGAGATCGCGGTGGAAGAGGCGATCCGGCTCAAGGAAGCCGGCA
AGGCAGAAGAAATCATCGTCGTCTCGATCGGCCCGCAGCAGGCGCAGGAAACCCTGCGCACCGCGCTCGCCATGGGCGCC
GACCGCGCCATCCTGGTCAAGACCGACGAGCAGACCGAGCCGCTTGGCGTCGCCAAGGTGCTGAAGGGTGTCGTCGATGC
CGAACAGCCCGGCCTCGTCATCCTCGGCAAGCAGGCGATCGACGACGATTCCAATCAGACCGGCCAGATGCTGGCGGCCC
TGCTCGGCTGGGCGCAAGGCACGTTCGCTTCCAAGGTGGTGCTCGATGGCGACAAGGCCAAGGTGACCCGCGAAGTCGAC
GGCGGCCTGCAAACGGTGGAACTGAAGATGCCGGCGATCATCACCGCCGACCTTCGCCTCAACCAGCCGCGCTATGCCTC
GCTGCCCAACATCATGAAGGCCAAGAAGAAGCAGCTCGACGAAAAGACCCCGGCCGACTACGGCGCCGACGTCAAGCCGC
GCCTCAAGGTCATCAAGACCGAGGAGCCCGGCGGCCGCAAGGCGGGCGTCAAGGTCAAGAGCGTCGCCGAACTGGTCGAC
AAGCTCAAGAACGAAGCCGGCGTTTTGTAA

Upstream 100 bases:

>100_bases
CGTCTGGCCGGAATTCAGTCAGGAATGTCGGCTTTCGACAACTCAGAAGGGGCGCAAGCTGTTATAGCGCGCCCAACTAG
CGTGAAGAGGTGACAGGCAA

Downstream 100 bases:

>100_bases
ACGATCGGGAAAGGAACAGACAAGATGGCAATTCTCCTCATCGCCGAACACGACAACGCCAGCCTTTCCGACCAGACCGC
CAAGGCGCTTTCGGCGGCCC

Product: electron transfer flavoprotein beta chain, (ETFSS)

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVPVKRVVDANVKVRVKADGSAVELANVKMAMNPFDEIAVEEAIRLKEAGKAEEIIVVSIGPQQAQETLRTALAMGA
DRAILVKTDEQTEPLGVAKVLKGVVDAEQPGLVILGKQAIDDDSNQTGQMLAALLGWAQGTFASKVVLDGDKAKVTREVD
GGLQTVELKMPAIITADLRLNQPRYASLPNIMKAKKKQLDEKTPADYGADVKPRLKVIKTEEPGGRKAGVKVKSVAELVD
KLKNEAGVL

Sequences:

>Translated_249_residues
MKILVPVKRVVDANVKVRVKADGSAVELANVKMAMNPFDEIAVEEAIRLKEAGKAEEIIVVSIGPQQAQETLRTALAMGA
DRAILVKTDEQTEPLGVAKVLKGVVDAEQPGLVILGKQAIDDDSNQTGQMLAALLGWAQGTFASKVVLDGDKAKVTREVD
GGLQTVELKMPAIITADLRLNQPRYASLPNIMKAKKKQLDEKTPADYGADVKPRLKVIKTEEPGGRKAGVKVKSVAELVD
KLKNEAGVL
>Mature_249_residues
MKILVPVKRVVDANVKVRVKADGSAVELANVKMAMNPFDEIAVEEAIRLKEAGKAEEIIVVSIGPQQAQETLRTALAMGA
DRAILVKTDEQTEPLGVAKVLKGVVDAEQPGLVILGKQAIDDDSNQTGQMLAALLGWAQGTFASKVVLDGDKAKVTREVD
GGLQTVELKMPAIITADLRLNQPRYASLPNIMKAKKKQLDEKTPADYGADVKPRLKVIKTEEPGGRKAGVKVKSVAELVD
KLKNEAGVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=248, Percent_Identity=58.8709677419355, Blast_Score=282, Evalue=2e-76,
Organism=Homo sapiens, GI62420877, Length=232, Percent_Identity=59.051724137931, Blast_Score=264, Evalue=6e-71,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=52.1739130434783, Blast_Score=229, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=50, Blast_Score=232, Evalue=4e-62,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=56.0975609756098, Blast_Score=248, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=56.0975609756098, Blast_Score=248, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26662; Mature: 26662

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPVKRVVDANVKVRVKADGSAVELANVKMAMNPFDEIAVEEAIRLKEAGKAEEIIV
CEEEECCHHHHCCCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
VSIGPQQAQETLRTALAMGADRAILVKTDEQTEPLGVAKVLKGVVDAEQPGLVILGKQAI
EEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALLGWAQGTFASKVVLDGDKAKVTREVDGGLQTVELKMPAIITADLRL
CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHEEEEECCCCEEEEEEECCEEEEECEEE
NQPRYASLPNIMKAKKKQLDEKTPADYGADVKPRLKVIKTEEPGGRKAGVKVKSVAELVD
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
KLKNEAGVL
HHHHHCCCC
>Mature Secondary Structure
MKILVPVKRVVDANVKVRVKADGSAVELANVKMAMNPFDEIAVEEAIRLKEAGKAEEIIV
CEEEECCHHHHCCCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
VSIGPQQAQETLRTALAMGADRAILVKTDEQTEPLGVAKVLKGVVDAEQPGLVILGKQAI
EEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALLGWAQGTFASKVVLDGDKAKVTREVDGGLQTVELKMPAIITADLRL
CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHEEEEECCCCEEEEEEECCEEEEECEEE
NQPRYASLPNIMKAKKKQLDEKTPADYGADVKPRLKVIKTEEPGGRKAGVKVKSVAELVD
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
KLKNEAGVL
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]