| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473002
Identifier: 13473002
GI number: 13473002
Start: 2803908
End: 2804426
Strand: Direct
Name: 13473002
Synonym: mlr3476
Alternate gene names: NA
Gene position: 2803908-2804426 (Clockwise)
Preceding gene: 13473001
Following gene: 13473005
Centisome position: 39.85
GC content: 67.82
Gene sequence:
>519_bases ATGACAGCGACCATGATTGCCGACACCGGACGCCAGCGGACGCGGACCGCGCTGTTTCTTGCCGTCGCCATGGCCGCGAC CGTCGGCTCGGCGCTCGGCTTCCAGTACATTGGCGGCTATATCCCTTGCCATCTCTGCCTGGAGCAGCGCACCCCCTATT ATATCGGCGCACCGCTGATGGTGCTGGCGGCCATTGCCTCGATGCTACGGGCGCCGGCTTGGCTGACGCGCAGCCTGCTC GGCATTGGCGGTCTCTTGATGCTCTACGGCCTCTATCTCGGCGTCTATCATTCCGGCGTCGAATGGCAGTGGTGGGCCGG CCCGACCGACTGCACGGCGGGCGCCGGCCCGGTCGACACCGGCGGCAAGGGCGTGCTCGACGCGCTCGACAAATTCGTGC CGCCCTCCTGCGACAAGGCGGCACTGCGCATCCTGGGCCTGTCGCTGGCCGGCTGGAACGCCATCGCCAGCCTTATCCTG GCCGCCGTCGCCTTCCGCGGCGCGTTTGCCAAGGACTGA
Upstream 100 bases:
>100_bases GGGCTGATCGCCGGCGCCGCGGCCGCTGCCCTGATTTTGCTCTATATCGTCGTCAAATACGCGTTTTAAGCGGCCGGCGA ACTCAACGGACAAAAGACCC
Downstream 100 bases:
>100_bases TCTGGCGCGGCGCGAGATCGTTCAAGAATTCGGCAGGCTGAGTCGGGTGAAGTGATTTTCGGGAACCGGAGCGGAGCGTA CTTAAGTACGTGAGCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Disulfide Bond Formation Protein B; Disulfide Bond Formation Protein DsbB; Disulfide Bond Formation Protein DsbB Family; Transmembrane Protein; DsbB Domain-Containing Protein; DsbB Family Disulfide Bond Formation Protein; Disulfide Bond Formation Protein Dsbb
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTATMIADTGRQRTRTALFLAVAMAATVGSALGFQYIGGYIPCHLCLEQRTPYYIGAPLMVLAAIASMLRAPAWLTRSLL GIGGLLMLYGLYLGVYHSGVEWQWWAGPTDCTAGAGPVDTGGKGVLDALDKFVPPSCDKAALRILGLSLAGWNAIASLIL AAVAFRGAFAKD
Sequences:
>Translated_172_residues MTATMIADTGRQRTRTALFLAVAMAATVGSALGFQYIGGYIPCHLCLEQRTPYYIGAPLMVLAAIASMLRAPAWLTRSLL GIGGLLMLYGLYLGVYHSGVEWQWWAGPTDCTAGAGPVDTGGKGVLDALDKFVPPSCDKAALRILGLSLAGWNAIASLIL AAVAFRGAFAKD >Mature_171_residues TATMIADTGRQRTRTALFLAVAMAATVGSALGFQYIGGYIPCHLCLEQRTPYYIGAPLMVLAAIASMLRAPAWLTRSLLG IGGLLMLYGLYLGVYHSGVEWQWWAGPTDCTAGAGPVDTGGKGVLDALDKFVPPSCDKAALRILGLSLAGWNAIASLILA AVAFRGAFAKD
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18067; Mature: 17936
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATMIADTGRQRTRTALFLAVAMAATVGSALGFQYIGGYIPCHLCLEQRTPYYIGAPLM CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCHHH VLAAIASMLRAPAWLTRSLLGIGGLLMLYGLYLGVYHSGVEWQWWAGPTDCTAGAGPVDT HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC GGKGVLDALDKFVPPSCDKAALRILGLSLAGWNAIASLILAAVAFRGAFAKD CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TATMIADTGRQRTRTALFLAVAMAATVGSALGFQYIGGYIPCHLCLEQRTPYYIGAPLM CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCHHH VLAAIASMLRAPAWLTRSLLGIGGLLMLYGLYLGVYHSGVEWQWWAGPTDCTAGAGPVDT HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC GGKGVLDALDKFVPPSCDKAALRILGLSLAGWNAIASLILAAVAFRGAFAKD CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA