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The map label for this gene is 13473001

Identifier: 13473001

GI number: 13473001

Start: 2803292

End: 2803876

Strand: Direct

Name: 13473001

Synonym: mlr3474

Alternate gene names: NA

Gene position: 2803292-2803876 (Clockwise)

Preceding gene: 13473000

Following gene: 13473002

Centisome position: 39.84

GC content: 62.05

Gene sequence:

>585_bases
ATGCTTCGCGGACTTTACGACTGGACCTTGTCGCTGGCGGCCAGGAAATCCGCGGAATGGTGGCTTGCCATCATCGCCTT
CATTGAAAGCTCCTTCTTCTTCGTGCCGGCCGATGTACTCTATCTGCCGATGGCGTTGGCACGCCCCGACCGCGCCTACC
GCTATGCGCTGACTGCCACGGCCGCCTCGGTGCTGGGCGGCATCGCCGGCTGGATGATCGGCTATTTCGCCTACGACACC
ATCGCCCGTCCGATCCTGGAGCATTTCGGCGGCCTGGAGACCTTCGAGCGCTGGCAGAATTCTGGCATCGGCCTGATGCT
GGTGCTGCTCGTTACTTCCGGTCTCGCGCACCTGCCGCCGATCAAGGTCGTCACCATCCTTGCCGGCGCCCTGCACGTCA
ATTTGCTGATCTTCATCATCTCGGCCATCGTCGCTCGCGGCGCGCGCTTCCTGCTCTTGGCCTGGCTGCTGCGCCGCTAT
GGCGAATCGATCCGCGAATTCATCGAAAAGCGCCTCGGGCTGATCGCCGGCGCCGCGGCCGCTGCCCTGATTTTGCTCTA
TATCGTCGTCAAATACGCGTTTTAA

Upstream 100 bases:

>100_bases
CGTCCCACCGAATGGATGGCGCGCTTTGGGTCTTTGTTTTGTGCATGCCATTGCCCCGAAACCGCTGCGCACCGTTTGGG
CGACACGCATAGGAGTGCCG

Downstream 100 bases:

>100_bases
GCGGCCGGCGAACTCAACGGACAAAAGACCCATGACAGCGACCATGATTGCCGACACCGGACGCCAGCGGACGCGGACCG
CGCTGTTTCTTGCCGTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MLRGLYDWTLSLAARKSAEWWLAIIAFIESSFFFVPADVLYLPMALARPDRAYRYALTATAASVLGGIAGWMIGYFAYDT
IARPILEHFGGLETFERWQNSGIGLMLVLLVTSGLAHLPPIKVVTILAGALHVNLLIFIISAIVARGARFLLLAWLLRRY
GESIREFIEKRLGLIAGAAAAALILLYIVVKYAF

Sequences:

>Translated_194_residues
MLRGLYDWTLSLAARKSAEWWLAIIAFIESSFFFVPADVLYLPMALARPDRAYRYALTATAASVLGGIAGWMIGYFAYDT
IARPILEHFGGLETFERWQNSGIGLMLVLLVTSGLAHLPPIKVVTILAGALHVNLLIFIISAIVARGARFLLLAWLLRRY
GESIREFIEKRLGLIAGAAAAALILLYIVVKYAF
>Mature_194_residues
MLRGLYDWTLSLAARKSAEWWLAIIAFIESSFFFVPADVLYLPMALARPDRAYRYALTATAASVLGGIAGWMIGYFAYDT
IARPILEHFGGLETFERWQNSGIGLMLVLLVTSGLAHLPPIKVVTILAGALHVNLLIFIISAIVARGARFLLLAWLLRRY
GESIREFIEKRLGLIAGAAAAALILLYIVVKYAF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21476; Mature: 21476

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGLYDWTLSLAARKSAEWWLAIIAFIESSFFFVPADVLYLPMALARPDRAYRYALTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHCCCHHHHHHHHHH
AASVLGGIAGWMIGYFAYDTIARPILEHFGGLETFERWQNSGIGLMLVLLVTSGLAHLPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
IKVVTILAGALHVNLLIFIISAIVARGARFLLLAWLLRRYGESIREFIEKRLGLIAGAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALILLYIVVKYAF
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLRGLYDWTLSLAARKSAEWWLAIIAFIESSFFFVPADVLYLPMALARPDRAYRYALTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHCCCHHHHHHHHHH
AASVLGGIAGWMIGYFAYDTIARPILEHFGGLETFERWQNSGIGLMLVLLVTSGLAHLPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
IKVVTILAGALHVNLLIFIISAIVARGARFLLLAWLLRRYGESIREFIEKRLGLIAGAAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALILLYIVVKYAF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478068 [H]