| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472988
Identifier: 13472988
GI number: 13472988
Start: 2787688
End: 2788089
Strand: Reverse
Name: 13472988
Synonym: mll3458
Alternate gene names: NA
Gene position: 2788089-2787688 (Counterclockwise)
Preceding gene: 13472989
Following gene: 13472987
Centisome position: 39.63
GC content: 63.18
Gene sequence:
>402_bases ATGGAAGATTTATCTCATCATGAAAAATTGATGGATGGCCGTGTCGTCGCGGCCGCGTCGCGGATTGGCTGGGGAGCGAT AGTTATGAGCCTCGACAGGGATTGGGATTCGATCCGGCCCGACCGCGGCTTTCGTGCCGCCGATGCGGGCATGGGCATTC TGCGCGTGACGCTGCTGTTCGGCTCGGCCGCGGTGGCGCTGGCGCTGATTGCGACCCCTTTCCTCGACAGCCAGACGCGC TCGCAATCGACGCGCGATAGTTTTTCCGGTGGTCTCGACATGACGGCCACCGGCTCGATCAGCCATCGCAGCACCTATAC GGTGCGCCGCAGCGTGCTGCAGGCGCAGCCCGGTTCGGTCTGCATCATCAGCTCCGATGGCAGAACCAGCGGCGACTGCT GA
Upstream 100 bases:
>100_bases TCCGATGCCGCCGGCCGACGCGCCGCTGATCCCGTTCCTGATCGATCTGCTCTGAGGATCCGGGACGGAGCGGGCCACGG GCCCATATCAGTCAGCGTTA
Downstream 100 bases:
>100_bases CATGGCTAAGATGTTTGGGGAAGGGCGGCCGTTTCACTGCCTGTTAAGCCTTTGCCATTAACCTTTCTTAACAGATCGGC GGTAGTATCCTGGCGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MEDLSHHEKLMDGRVVAAASRIGWGAIVMSLDRDWDSIRPDRGFRAADAGMGILRVTLLFGSAAVALALIATPFLDSQTR SQSTRDSFSGGLDMTATGSISHRSTYTVRRSVLQAQPGSVCIISSDGRTSGDC
Sequences:
>Translated_133_residues MEDLSHHEKLMDGRVVAAASRIGWGAIVMSLDRDWDSIRPDRGFRAADAGMGILRVTLLFGSAAVALALIATPFLDSQTR SQSTRDSFSGGLDMTATGSISHRSTYTVRRSVLQAQPGSVCIISSDGRTSGDC >Mature_133_residues MEDLSHHEKLMDGRVVAAASRIGWGAIVMSLDRDWDSIRPDRGFRAADAGMGILRVTLLFGSAAVALALIATPFLDSQTR SQSTRDSFSGGLDMTATGSISHRSTYTVRRSVLQAQPGSVCIISSDGRTSGDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14175; Mature: 14175
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDLSHHEKLMDGRVVAAASRIGWGAIVMSLDRDWDSIRPDRGFRAADAGMGILRVTLLF CCCHHHHHHHHCCHHEEHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH GSAAVALALIATPFLDSQTRSQSTRDSFSGGLDMTATGSISHRSTYTVRRSVLQAQPGSV HHHHHHHHHHHHCCCCCCHHCCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCE CIISSDGRTSGDC EEEECCCCCCCCC >Mature Secondary Structure MEDLSHHEKLMDGRVVAAASRIGWGAIVMSLDRDWDSIRPDRGFRAADAGMGILRVTLLF CCCHHHHHHHHCCHHEEHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH GSAAVALALIATPFLDSQTRSQSTRDSFSGGLDMTATGSISHRSTYTVRRSVLQAQPGSV HHHHHHHHHHHHCCCCCCHHCCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCE CIISSDGRTSGDC EEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA