| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is nudG [H]
Identifier: 13472989
GI number: 13472989
Start: 2788135
End: 2788557
Strand: Reverse
Name: nudG [H]
Synonym: mll3459
Alternate gene names: 13472989
Gene position: 2788557-2788135 (Counterclockwise)
Preceding gene: 13472990
Following gene: 13472988
Centisome position: 39.63
GC content: 65.72
Gene sequence:
>423_bases ATGAATGATCTGGCCAATGCCGGCAAGCGCCTGCTCCTGGTCGCGGCCTGCGCGCTGGTCGATACCGACGGCCGGGTGCT GCTCGCGCAGCGGCCCGAGGGCAAGCAGCTTGCCGGCCTGTGGGAATTTCCCGGCGGCAAGGTCGAGCCCGGCGAGACGC CGGAACAATGCATCATCCGCGAATTGCACGAGGAGATCGGCATCGAGACCGAAATCCCGTGCCTGGCGCCGCTTACCTTC GCCAGCCATTCCTATAACGACTTCCATCTGTTGATGCCGCTGTTTGTCTGCCGCCGCTTCCGCGGCATCGCCCAGCCCCG GGAAGGGCAGGCGCTGAAATGGGTGCGGCCGAGAGAGATGCGCGACTATCCGATGCCGCCGGCCGACGCGCCGCTGATCC CGTTCCTGATCGATCTGCTCTGA
Upstream 100 bases:
>100_bases CCGGCAATGTGCCGGCGCTGGCGCTCTATCGGTCGCTCGGCTTCGAGGAAGTCTATCGCTACCATTATCGCCGGCCGCCT GGTCATGAGTGAAATTGGGC
Downstream 100 bases:
>100_bases GGATCCGGGACGGAGCGGGCCACGGGCCCATATCAGTCAGCGTTAATGGAAGATTTATCTCATCATGAAAAATTGATGGA TGGCCGTGTCGTCGCGGCCG
Product: mutator protein mutT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MNDLANAGKRLLLVAACALVDTDGRVLLAQRPEGKQLAGLWEFPGGKVEPGETPEQCIIRELHEEIGIETEIPCLAPLTF ASHSYNDFHLLMPLFVCRRFRGIAQPREGQALKWVRPREMRDYPMPPADAPLIPFLIDLL
Sequences:
>Translated_140_residues MNDLANAGKRLLLVAACALVDTDGRVLLAQRPEGKQLAGLWEFPGGKVEPGETPEQCIIRELHEEIGIETEIPCLAPLTF ASHSYNDFHLLMPLFVCRRFRGIAQPREGQALKWVRPREMRDYPMPPADAPLIPFLIDLL >Mature_140_residues MNDLANAGKRLLLVAACALVDTDGRVLLAQRPEGKQLAGLWEFPGGKVEPGETPEQCIIRELHEEIGIETEIPCLAPLTF ASHSYNDFHLLMPLFVCRRFRGIAQPREGQALKWVRPREMRDYPMPPADAPLIPFLIDLL
Specific function: Specific for pyrimidine substrates. Acts on 5-methyl- dCTP, CTP and dCTP in decreasing order [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=130, Percent_Identity=40.7692307692308, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI1786288, Length=130, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.1.-
Molecular weight: Translated: 15714; Mature: 15714
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLANAGKRLLLVAACALVDTDGRVLLAQRPEGKQLAGLWEFPGGKVEPGETPEQCIIR CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHH ELHEEIGIETEIPCLAPLTFASHSYNDFHLLMPLFVCRRFRGIAQPREGQALKWVRPREM HHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC RDYPMPPADAPLIPFLIDLL CCCCCCCCCCCHHHHHHHHC >Mature Secondary Structure MNDLANAGKRLLLVAACALVDTDGRVLLAQRPEGKQLAGLWEFPGGKVEPGETPEQCIIR CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHH ELHEEIGIETEIPCLAPLTFASHSYNDFHLLMPLFVCRRFRGIAQPREGQALKWVRPREM HHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCC RDYPMPPADAPLIPFLIDLL CCCCCCCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 11053429 [H]