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The map label for this gene is yliD [C]

Identifier: 13472944

GI number: 13472944

Start: 2731399

End: 2732229

Strand: Direct

Name: yliD [C]

Synonym: mlr3399

Alternate gene names: 13472944

Gene position: 2731399-2732229 (Clockwise)

Preceding gene: 13472943

Following gene: 13472945

Centisome position: 38.82

GC content: 69.19

Gene sequence:

>831_bases
ATGAGCCCGATCCACCGTTTCCTGCGCACCCCCGAGGCGGTCGCCGGCGCCATCCTGCTGGCAGCACTGATTGCGATGGC
GCTCATTGCGCCGCTGCTGTTTCCCGGTGACCCGCAAGCCATCGCCGGCCCGGCGCTGCTGCCGCCGTTCCAGGACTGGT
CACTGCCGCTCGGCACCGATCGGCTCGGCCGCGACGTGCTGGCCGAACTCTTTCACGGCGCCCGCACCTCGCTCGCTGTC
GGCCTTGCTGCTGCTGCGGCGGCACTTGCCATCGGCTCGGTGGTCGGCACGCTTGGCGGCTTTGCCGGCGGCCTCGTCGA
CGAGGTGCTGATGCGCATCACCGATGCTTTCCAGACCGTGCCGAGCTTCCTGCTGGCACTGGCATTCGTCAGCGTCGTCG
GCCCATCGCTCGGCATCGTCGTCATTGCCATCGCGCTCGGCACCTGGCCCGGCCCGGCCCGCATCGCCCGCGCCGAAGTC
CTCTCCATCCGCGAACGCGACTATGTCGCCAGTGCGCGTGCCATCGGCATGCACCCGCTCGAGATCGCCTTTCGCGAGGT
GTTGCCCAACGCCTTGCCGCCAGTGCTGGCAATGTCCTCGGTGATCGTCGCAGCCGCAATCCTCACCGAGGCGGCGCTAT
CCTTCCTCGGCCTCGGCGACCCCAACCGTGTCACCTGGGGCGGGATGATCGCCGAGGGTCGCGCCGTGCTGCGCACCGCC
CCCTTCCTGTCGATCGTCCCGGGCATCGCGCTGGTTCTGACCGTGCTCGGCGTCTATCTCGCCGGCGAAGGCATTGTCGA
GACGACGGCCGTCAGGAGAGGCCTGTCGTGA

Upstream 100 bases:

>100_bases
TCATCCTCACCAGCGCCGTCCTGGTCGTCGTCATCAACCTGCTGGTCGACATCGCCTATGCCTTCCTCGATCCGCGCGTC
GGTACCGGCGAGGCTGGCGC

Downstream 100 bases:

>100_bases
GCGCGCTCGCTTCGATCCGCGACCTGACGGTGACCTATCGCCGCGACGGCACCGCGGTGGCGGCGCTGAAGAACATCAAC
CTCGACATCGTGGCTGGCGA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSPIHRFLRTPEAVAGAILLAALIAMALIAPLLFPGDPQAIAGPALLPPFQDWSLPLGTDRLGRDVLAELFHGARTSLAV
GLAAAAAALAIGSVVGTLGGFAGGLVDEVLMRITDAFQTVPSFLLALAFVSVVGPSLGIVVIAIALGTWPGPARIARAEV
LSIRERDYVASARAIGMHPLEIAFREVLPNALPPVLAMSSVIVAAAILTEAALSFLGLGDPNRVTWGGMIAEGRAVLRTA
PFLSIVPGIALVLTVLGVYLAGEGIVETTAVRRGLS

Sequences:

>Translated_276_residues
MSPIHRFLRTPEAVAGAILLAALIAMALIAPLLFPGDPQAIAGPALLPPFQDWSLPLGTDRLGRDVLAELFHGARTSLAV
GLAAAAAALAIGSVVGTLGGFAGGLVDEVLMRITDAFQTVPSFLLALAFVSVVGPSLGIVVIAIALGTWPGPARIARAEV
LSIRERDYVASARAIGMHPLEIAFREVLPNALPPVLAMSSVIVAAAILTEAALSFLGLGDPNRVTWGGMIAEGRAVLRTA
PFLSIVPGIALVLTVLGVYLAGEGIVETTAVRRGLS
>Mature_275_residues
SPIHRFLRTPEAVAGAILLAALIAMALIAPLLFPGDPQAIAGPALLPPFQDWSLPLGTDRLGRDVLAELFHGARTSLAVG
LAAAAAALAIGSVVGTLGGFAGGLVDEVLMRITDAFQTVPSFLLALAFVSVVGPSLGIVVIAIALGTWPGPARIARAEVL
SIRERDYVASARAIGMHPLEIAFREVLPNALPPVLAMSSVIVAAAILTEAALSFLGLGDPNRVTWGGMIAEGRAVLRTAP
FLSIVPGIALVLTVLGVYLAGEGIVETTAVRRGLS

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=274, Percent_Identity=34.3065693430657, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=35.632183908046, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789889, Length=236, Percent_Identity=36.0169491525424, Blast_Score=134, Evalue=9e-33,
Organism=Escherichia coli, GI1789964, Length=277, Percent_Identity=36.4620938628159, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1787498, Length=264, Percent_Identity=32.1969696969697, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787549, Length=270, Percent_Identity=33.7037037037037, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788505, Length=212, Percent_Identity=33.0188679245283, Blast_Score=101, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28323; Mature: 28192

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIHRFLRTPEAVAGAILLAALIAMALIAPLLFPGDPQAIAGPALLPPFQDWSLPLGTD
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCH
RLGRDVLAELFHGARTSLAVGLAAAAAALAIGSVVGTLGGFAGGLVDEVLMRITDAFQTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSFLLALAFVSVVGPSLGIVVIAIALGTWPGPARIARAEVLSIRERDYVASARAIGMHPL
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EIAFREVLPNALPPVLAMSSVIVAAAILTEAALSFLGLGDPNRVTWGGMIAEGRAVLRTA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCHHHHHHH
PFLSIVPGIALVLTVLGVYLAGEGIVETTAVRRGLS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SPIHRFLRTPEAVAGAILLAALIAMALIAPLLFPGDPQAIAGPALLPPFQDWSLPLGTD
CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCH
RLGRDVLAELFHGARTSLAVGLAAAAAALAIGSVVGTLGGFAGGLVDEVLMRITDAFQTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PSFLLALAFVSVVGPSLGIVVIAIALGTWPGPARIARAEVLSIRERDYVASARAIGMHPL
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EIAFREVLPNALPPVLAMSSVIVAAAILTEAALSFLGLGDPNRVTWGGMIAEGRAVLRTA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCHHHHHHH
PFLSIVPGIALVLTVLGVYLAGEGIVETTAVRRGLS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]