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The map label for this gene is appB [H]

Identifier: 13472943

GI number: 13472943

Start: 2730416

End: 2731402

Strand: Direct

Name: appB [H]

Synonym: mlr3397

Alternate gene names: 13472943

Gene position: 2730416-2731402 (Clockwise)

Preceding gene: 13472942

Following gene: 13472944

Centisome position: 38.81

GC content: 67.07

Gene sequence:

>987_bases
ATGACCCGCGCCCTCATCCTTCTCCGCCGCCGTCTCGTCGGCAGCGTCTTCGTGCTGCTGATCGTTGTCATCGGCACGTT
CTTGCTGCTCGAAGCCGCCCCCGGCGATGCCGTTGACGCCTATATCGTCTCGACCGGCGGCGACGCCGGCATGATCGAAT
TGCTGCGCCATCGCTGGGGCCTCGACCAATCGGAACTGACGCGGCTTGCCAATTATCTCTGGGCGCTGCTGCATCTCGAT
CTCGGCCAGTCGGTGACCTTCTCCAGGCCGATCCGCGACGTGATTCTCGAACGGTTGCCCAACACACTGCTGCTGATGGT
CAGCGCCACCGCGCTGTCTTTCGGTCTGGGTTCCGCCCTCGGCATCTATGCCGGCGCCAGGCCCGGCAGCGCCCGCGACC
GCTTCCTGTCGATCGGCTCGTTGGCGCTCTATGCCGTGCCGGGTTTCTGGCTCGGCCTGGTGCTGATCGTCGTCTTTGCC
GTCGACTTGCGCTGGCTGCCGATCGGCGGCATCGAGACGCTCGCCTCGGACAAGACCGGCCTCGACCGCGTCGCCGACAT
CGCCATCCATCTCATCCTGCCGGTGGCCGCACTCGGCTTCATCTACCTCGCGCTCTATCTGCGCATGATGCGCGCCGGCA
TGGCCGAGGCCTGGCGGCAGGATTTTGTCCTCGCCGCCCGCGCCAGGGGGCTGTCGCGCCGCCGCGTCGTGCTCGCCCAC
GTCGCCCGCAATGCGCTGCTGCCGCTCATCACCATGCTCGGCCTGCAGTCGGCGCAGATGCTTGGCGGCAGCGTCGTCAT
CGAGAGCGTCTTTTCCGTGCCGGGTCTCGGCCGGCTGGCACAGGAAGCGGTGGCTTCGCGCGACACGCCTCTGCTGCTCG
GCATCATCCTCACCAGCGCCGTCCTGGTCGTCGTCATCAACCTGCTGGTCGACATCGCCTATGCCTTCCTCGATCCGCGC
GTCGGTACCGGCGAGGCTGGCGCATGA

Upstream 100 bases:

>100_bases
ACAACGGCTGATCTCCCCCCAAGTGGGGGAGATGTCCGGCAGGACAGAGGGGGCGCCGTAGAACTCGGCGCTTGTGGCTT
AGCCCTAGTGCGGTTTCGCC

Downstream 100 bases:

>100_bases
GCCCGATCCACCGTTTCCTGCGCACCCCCGAGGCGGTCGCCGGCGCCATCCTGCTGGCAGCACTGATTGCGATGGCGCTC
ATTGCGCCGCTGCTGTTTCC

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTRALILLRRRLVGSVFVLLIVVIGTFLLLEAAPGDAVDAYIVSTGGDAGMIELLRHRWGLDQSELTRLANYLWALLHLD
LGQSVTFSRPIRDVILERLPNTLLLMVSATALSFGLGSALGIYAGARPGSARDRFLSIGSLALYAVPGFWLGLVLIVVFA
VDLRWLPIGGIETLASDKTGLDRVADIAIHLILPVAALGFIYLALYLRMMRAGMAEAWRQDFVLAARARGLSRRRVVLAH
VARNALLPLITMLGLQSAQMLGGSVVIESVFSVPGLGRLAQEAVASRDTPLLLGIILTSAVLVVVINLLVDIAYAFLDPR
VGTGEAGA

Sequences:

>Translated_328_residues
MTRALILLRRRLVGSVFVLLIVVIGTFLLLEAAPGDAVDAYIVSTGGDAGMIELLRHRWGLDQSELTRLANYLWALLHLD
LGQSVTFSRPIRDVILERLPNTLLLMVSATALSFGLGSALGIYAGARPGSARDRFLSIGSLALYAVPGFWLGLVLIVVFA
VDLRWLPIGGIETLASDKTGLDRVADIAIHLILPVAALGFIYLALYLRMMRAGMAEAWRQDFVLAARARGLSRRRVVLAH
VARNALLPLITMLGLQSAQMLGGSVVIESVFSVPGLGRLAQEAVASRDTPLLLGIILTSAVLVVVINLLVDIAYAFLDPR
VGTGEAGA
>Mature_327_residues
TRALILLRRRLVGSVFVLLIVVIGTFLLLEAAPGDAVDAYIVSTGGDAGMIELLRHRWGLDQSELTRLANYLWALLHLDL
GQSVTFSRPIRDVILERLPNTLLLMVSATALSFGLGSALGIYAGARPGSARDRFLSIGSLALYAVPGFWLGLVLIVVFAV
DLRWLPIGGIETLASDKTGLDRVADIAIHLILPVAALGFIYLALYLRMMRAGMAEAWRQDFVLAARARGLSRRRVVLAHV
ARNALLPLITMLGLQSAQMLGGSVVIESVFSVPGLGRLAQEAVASRDTPLLLGIILTSAVLVVVINLLVDIAYAFLDPRV
GTGEAGA

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=312, Percent_Identity=36.5384615384615, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1789965, Length=321, Percent_Identity=33.6448598130841, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1789888, Length=333, Percent_Identity=33.6336336336336, Blast_Score=160, Evalue=8e-41,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=32.4324324324324, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1787497, Length=318, Percent_Identity=28.9308176100629, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1787550, Length=261, Percent_Identity=32.5670498084291, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788504, Length=285, Percent_Identity=30.8771929824561, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35165; Mature: 35034

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRALILLRRRLVGSVFVLLIVVIGTFLLLEAAPGDAVDAYIVSTGGDAGMIELLRHRWG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHC
LDQSELTRLANYLWALLHLDLGQSVTFSRPIRDVILERLPNTLLLMVSATALSFGLGSAL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GIYAGARPGSARDRFLSIGSLALYAVPGFWLGLVLIVVFAVDLRWLPIGGIETLASDKTG
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHCCCCC
LDRVADIAIHLILPVAALGFIYLALYLRMMRAGMAEAWRQDFVLAARARGLSRRRVVLAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VARNALLPLITMLGLQSAQMLGGSVVIESVFSVPGLGRLAQEAVASRDTPLLLGIILTSA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
VLVVVINLLVDIAYAFLDPRVGTGEAGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TRALILLRRRLVGSVFVLLIVVIGTFLLLEAAPGDAVDAYIVSTGGDAGMIELLRHRWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHC
LDQSELTRLANYLWALLHLDLGQSVTFSRPIRDVILERLPNTLLLMVSATALSFGLGSAL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GIYAGARPGSARDRFLSIGSLALYAVPGFWLGLVLIVVFAVDLRWLPIGGIETLASDKTG
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHCCCCC
LDRVADIAIHLILPVAALGFIYLALYLRMMRAGMAEAWRQDFVLAARARGLSRRRVVLAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VARNALLPLITMLGLQSAQMLGGSVVIESVFSVPGLGRLAQEAVASRDTPLLLGIILTSA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
VLVVVINLLVDIAYAFLDPRVGTGEAGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]