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The map label for this gene is 13472938

Identifier: 13472938

GI number: 13472938

Start: 2725024

End: 2725839

Strand: Direct

Name: 13472938

Synonym: mlr3388

Alternate gene names: NA

Gene position: 2725024-2725839 (Clockwise)

Preceding gene: 13472937

Following gene: 13472939

Centisome position: 38.73

GC content: 63.6

Gene sequence:

>816_bases
ATGATCGACAAGGGCGTGCCGATCGTCGGCGGCGGCGCCGGCACCGGCCTGTCGGCCAAGGCCGAGGAGGCCGGCGGCAT
CGACCTGATCATCATCTACAATTCCGGCCGCTACCGCATGGCTGGGCGCGGCTCGGCCGCCGGTCTGCTCGCCTATGGCA
ATGCCAATGAGATCGTCAAGGAAATGGCCTATGAGGTGCTGCCGGTGGTCAGGCACACGCCGGTGCTGGCCGGCGTCAAC
GGCACCGACCCCTTCGTCATCATGCCGCTGCTGCTTGCTGAACTGAAGACAATGGGCTTTTCCGGCGTGCAGAATTTTCC
GACCATCGGCCTGTTCGACGGCAGCATGCGGCAAAGTTTCGAGGAAACCGGCATGGGCTTCGGGCTCGAGGTCGACATGA
TCGCCGAGGCGCACAAGCTCGACCTCTTGACCACGCCCTATGTCTTCAATCCAAACGAGGCGCGCGCCATGACCAAAGCC
GGCGCCGACATCGTGGTCGCCCATATGGGTGTGACGACCGGCGGCTCGATCGGCGCCACCTCGGCCAAATCGCTCGACGA
TTGCGTGACCGCGATCGACGCCATCGCTGATGCCGCCCGCTCGGTGCGCAAGGACGTCATCTTGCTTTGCCATGGCGGGC
CGATCTCGATGCCGGACGACGCCCGTTACATTCTCGACCGCTGCAAGGGCCTGCATGGCTTCTATGGCGCGAGCTCGATG
GAGCGGCTGCCGGCAGAAACGGCGATCGCCAGGCAGACAGCCGATTTCAAGGCCGTCAAACTGGGCGAAGCGACCATGAA
GAAAAAGAAGGGATGA

Upstream 100 bases:

>100_bases
TCGCCAAGGCTGTCGCGGCTTTTCTCGACATCGCCAGACACTGAGGTCCAAAAATATGCCTGCAATACCGCGCAAGGACA
TACTGAAGAAATTCCGGGGA

Downstream 100 bases:

>100_bases
GACGATGACCGACAAGAGCAAGGTGTTTGTCTACCCGAAGGACGTCAGCGCCTTCGGCTTCGACTGGGGCAGGCTGGCTC
TGACAGTCGCTCCGGAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MIDKGVPIVGGGAGTGLSAKAEEAGGIDLIIIYNSGRYRMAGRGSAAGLLAYGNANEIVKEMAYEVLPVVRHTPVLAGVN
GTDPFVIMPLLLAELKTMGFSGVQNFPTIGLFDGSMRQSFEETGMGFGLEVDMIAEAHKLDLLTTPYVFNPNEARAMTKA
GADIVVAHMGVTTGGSIGATSAKSLDDCVTAIDAIADAARSVRKDVILLCHGGPISMPDDARYILDRCKGLHGFYGASSM
ERLPAETAIARQTADFKAVKLGEATMKKKKG

Sequences:

>Translated_271_residues
MIDKGVPIVGGGAGTGLSAKAEEAGGIDLIIIYNSGRYRMAGRGSAAGLLAYGNANEIVKEMAYEVLPVVRHTPVLAGVN
GTDPFVIMPLLLAELKTMGFSGVQNFPTIGLFDGSMRQSFEETGMGFGLEVDMIAEAHKLDLLTTPYVFNPNEARAMTKA
GADIVVAHMGVTTGGSIGATSAKSLDDCVTAIDAIADAARSVRKDVILLCHGGPISMPDDARYILDRCKGLHGFYGASSM
ERLPAETAIARQTADFKAVKLGEATMKKKKG
>Mature_271_residues
MIDKGVPIVGGGAGTGLSAKAEEAGGIDLIIIYNSGRYRMAGRGSAAGLLAYGNANEIVKEMAYEVLPVVRHTPVLAGVN
GTDPFVIMPLLLAELKTMGFSGVQNFPTIGLFDGSMRQSFEETGMGFGLEVDMIAEAHKLDLLTTPYVFNPNEARAMTKA
GADIVVAHMGVTTGGSIGATSAKSLDDCVTAIDAIADAARSVRKDVILLCHGGPISMPDDARYILDRCKGLHGFYGASSM
ERLPAETAIARQTADFKAVKLGEATMKKKKG

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 28399; Mature: 28399

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDKGVPIVGGGAGTGLSAKAEEAGGIDLIIIYNSGRYRMAGRGSAAGLLAYGNANEIVK
CCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCEEEEECCHHHHHH
EMAYEVLPVVRHTPVLAGVNGTDPFVIMPLLLAELKTMGFSGVQNFPTIGLFDGSMRQSF
HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHH
EETGMGFGLEVDMIAEAHKLDLLTTPYVFNPNEARAMTKAGADIVVAHMGVTTGGSIGAT
HHHCCCCCCCHHHHHHHHHCEEEECCEEECCCHHHHHHHCCCEEEEEEECCCCCCCCCCC
SAKSLDDCVTAIDAIADAARSVRKDVILLCHGGPISMPDDARYILDRCKGLHGFYGASSM
CHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHH
ERLPAETAIARQTADFKAVKLGEATMKKKKG
HHCCHHHHHHHHCCCCCEEECCHHHHHHCCC
>Mature Secondary Structure
MIDKGVPIVGGGAGTGLSAKAEEAGGIDLIIIYNSGRYRMAGRGSAAGLLAYGNANEIVK
CCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCEEEEECCHHHHHH
EMAYEVLPVVRHTPVLAGVNGTDPFVIMPLLLAELKTMGFSGVQNFPTIGLFDGSMRQSF
HHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHH
EETGMGFGLEVDMIAEAHKLDLLTTPYVFNPNEARAMTKAGADIVVAHMGVTTGGSIGAT
HHHCCCCCCCHHHHHHHHHCEEEECCEEECCCHHHHHHHCCCEEEEEEECCCCCCCCCCC
SAKSLDDCVTAIDAIADAARSVRKDVILLCHGGPISMPDDARYILDRCKGLHGFYGASSM
CHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHH
ERLPAETAIARQTADFKAVKLGEATMKKKKG
HHCCHHHHHHHHCCCCCEEECCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]