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The map label for this gene is 13472936

Identifier: 13472936

GI number: 13472936

Start: 2723008

End: 2723667

Strand: Reverse

Name: 13472936

Synonym: mll3386

Alternate gene names: NA

Gene position: 2723667-2723008 (Counterclockwise)

Preceding gene: 13472940

Following gene: 13472935

Centisome position: 38.71

GC content: 67.58

Gene sequence:

>660_bases
ATGGATGTCTCACGTCAACAATCCACGGCGAGCGACGACGCCGGCCAAGGGCCGAACCCGCGAGTAGAGCGTGGGGCTCG
CGCGCGTACTAGGCGGCTGATGCTGGAGACAGCGACAAGGCTGATGCAGGCCGGCGCAACGCCCTCGGTCAGCGAGGTCG
CGGAAGCAGCGGAAGTCTCGCGCGCCACGGCCTATCGCTATTTCCCCAGCCAGACAGCCCTGGTCCACGCGGTGGTCGAC
GAAGGGCTAGGCCCGATACTCGAGTGGCGATCCGATTCGTCCGATGCCGAACGCCGCGTGGGGGAGTTGATAGACAGCGC
GATGCCGCGCATCGAGGCCTTCGAGGCAACGTTCAAGGCAGCGCTGAAATTGTCGCTGGACCAATGGGCGCGCGGGCAGG
CAGGCACGCTGGGCGGCGAGCCACCCTTCACCCGTGGCCATCGCATGGACCTGCTGGAGGATGCGCTTGCGCCACTGAGG
GGCGAGCTGCCGCCGCGCGAATTCGAGCGCCTGGCGCAGGCGCTGTCGTTGATTTTCGGCGTCGAACTGCTGATTGTGCT
GAAGGACATCTGGGGCCTGGACAGCGGCAAGACCCTGGCCGTCGCCCGGTGGGCGGCCTCAGCGCTGGTGCGCCAGGCGC
GACTCCGGACGCCATCCTGA

Upstream 100 bases:

>100_bases
CCCCAATCCAGGCAGGCGCGATGCGTCTGCCGCTCATTGCCCGGCCGTTCGACGATGCGAAGGTCATTGCAAATTTTTGA
GACGCGCGTATCGTATTGAT

Downstream 100 bases:

>100_bases
CCAGGGGTGGTGGCGGCGTGAGTTGGGCATGGAGGAGGGCTGGACGAAGGCGGATGCAGGATATGAGACTTCTCCCGACG
CGGACCGGATTGGGGGGTCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Tetr-Family Regulatory Protein; Transcriptional Regulator TetR-Family; Regulatory Protein TetR

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDVSRQQSTASDDAGQGPNPRVERGARARTRRLMLETATRLMQAGATPSVSEVAEAAEVSRATAYRYFPSQTALVHAVVD
EGLGPILEWRSDSSDAERRVGELIDSAMPRIEAFEATFKAALKLSLDQWARGQAGTLGGEPPFTRGHRMDLLEDALAPLR
GELPPREFERLAQALSLIFGVELLIVLKDIWGLDSGKTLAVARWAASALVRQARLRTPS

Sequences:

>Translated_219_residues
MDVSRQQSTASDDAGQGPNPRVERGARARTRRLMLETATRLMQAGATPSVSEVAEAAEVSRATAYRYFPSQTALVHAVVD
EGLGPILEWRSDSSDAERRVGELIDSAMPRIEAFEATFKAALKLSLDQWARGQAGTLGGEPPFTRGHRMDLLEDALAPLR
GELPPREFERLAQALSLIFGVELLIVLKDIWGLDSGKTLAVARWAASALVRQARLRTPS
>Mature_219_residues
MDVSRQQSTASDDAGQGPNPRVERGARARTRRLMLETATRLMQAGATPSVSEVAEAAEVSRATAYRYFPSQTALVHAVVD
EGLGPILEWRSDSSDAERRVGELIDSAMPRIEAFEATFKAALKLSLDQWARGQAGTLGGEPPFTRGHRMDLLEDALAPLR
GELPPREFERLAQALSLIFGVELLIVLKDIWGLDSGKTLAVARWAASALVRQARLRTPS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23876; Mature: 23876

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSRQQSTASDDAGQGPNPRVERGARARTRRLMLETATRLMQAGATPSVSEVAEAAEVS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RATAYRYFPSQTALVHAVVDEGLGPILEWRSDSSDAERRVGELIDSAMPRIEAFEATFKA
HHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKLSLDQWARGQAGTLGGEPPFTRGHRMDLLEDALAPLRGELPPREFERLAQALSLIFG
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VELLIVLKDIWGLDSGKTLAVARWAASALVRQARLRTPS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDVSRQQSTASDDAGQGPNPRVERGARARTRRLMLETATRLMQAGATPSVSEVAEAAEVS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RATAYRYFPSQTALVHAVVDEGLGPILEWRSDSSDAERRVGELIDSAMPRIEAFEATFKA
HHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKLSLDQWARGQAGTLGGEPPFTRGHRMDLLEDALAPLRGELPPREFERLAQALSLIFG
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VELLIVLKDIWGLDSGKTLAVARWAASALVRQARLRTPS
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA