| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472940
Identifier: 13472940
GI number: 13472940
Start: 2726266
End: 2726946
Strand: Reverse
Name: 13472940
Synonym: mll3391
Alternate gene names: NA
Gene position: 2726946-2726266 (Counterclockwise)
Preceding gene: 13472941
Following gene: 13472936
Centisome position: 38.76
GC content: 54.19
Gene sequence:
>681_bases ATGGATCAGGAACCGCCAAGGCAAATCTTTCTCGACGCATGTTGCGAGATTTCTTCTCGGCTTGAATCTGTTGGATTTCG CTTTGCAAAAAGCGGTCCTCATGCAAGTCGCCGCGCCGGCGACTGGACATTCAGAATCTCCTTTCAGTCAAACTATCTGA ATGTCAGCGGAGAGTATGTCGAACTCGTCGTGCATGCGTCGGTCTACAACAAGGCAATAAGGGAATGGGATGAACGCAAC GGCTGGCCGGCCAATGGCAGCGATTGGATAGCCGGAGGACACCTCGGAAATTTGCGAACCCCGTATCACTGGCGGACATG GAACATCGCAAACCCGCTTACTCGTCAGGCTGAAATCGCGAACATCGTTGCCAACGTTCAGACGACTGTCCTGCCGTTCT TTGAGCGTTTTGGTGCTCCACGCGAACTGGCTGAAGAGCTCGCGCATTCTGAAGTTCCAGGTTTCATGTTCCCACAAAAT GCTGTTCGATTTGTATTCTGGCAGCTTGGTCCGGAGGCAGCGGAAAACTGTATGTCTTATTGGGTCGCGCGCTTACCTTC ACCGGATGTCTTCCGATCTGAGCGCGACGTCCCCACTCTGCGGGATAGGCTCGCTGCGGGGAGCGATGCCAACAACCTAG CAAGGGTCGCTCGTACGATGAAGATCGGCCTCAGCCTCTGA
Upstream 100 bases:
>100_bases TGACCGAGACTGGCTACGTGATGTTTGGAGATCGGGGTCGGGGGTGGAACAGGGGCGGGGCGTAATAGACGCTGGTTTGA TCGCCTGAGCATTCACCAAG
Downstream 100 bases:
>100_bases CGTTAGTCCTGCCCCGCCGGCAGCAACCGGAAATCCGGCAGGTCGCGCAGAGCCAATTCCGGGCCGGCGGGGGAGTAGAC AACGAAAAGCCGCATCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYVELVVHASVYNKAIREWDERN GWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIANIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQN AVRFVFWQLGPEAAENCMSYWVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL
Sequences:
>Translated_226_residues MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYVELVVHASVYNKAIREWDERN GWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIANIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQN AVRFVFWQLGPEAAENCMSYWVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL >Mature_226_residues MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYVELVVHASVYNKAIREWDERN GWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIANIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQN AVRFVFWQLGPEAAENCMSYWVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25612; Mature: 25612
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEECCCCEE ELVVHASVYNKAIREWDERNGWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIA EHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHH NIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQNAVRFVFWQLGPEAAENCMSY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH WVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL HHHHCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEECCCCEE ELVVHASVYNKAIREWDERNGWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIA EHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHH NIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQNAVRFVFWQLGPEAAENCMSY HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH WVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL HHHHCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA