Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472940

Identifier: 13472940

GI number: 13472940

Start: 2726266

End: 2726946

Strand: Reverse

Name: 13472940

Synonym: mll3391

Alternate gene names: NA

Gene position: 2726946-2726266 (Counterclockwise)

Preceding gene: 13472941

Following gene: 13472936

Centisome position: 38.76

GC content: 54.19

Gene sequence:

>681_bases
ATGGATCAGGAACCGCCAAGGCAAATCTTTCTCGACGCATGTTGCGAGATTTCTTCTCGGCTTGAATCTGTTGGATTTCG
CTTTGCAAAAAGCGGTCCTCATGCAAGTCGCCGCGCCGGCGACTGGACATTCAGAATCTCCTTTCAGTCAAACTATCTGA
ATGTCAGCGGAGAGTATGTCGAACTCGTCGTGCATGCGTCGGTCTACAACAAGGCAATAAGGGAATGGGATGAACGCAAC
GGCTGGCCGGCCAATGGCAGCGATTGGATAGCCGGAGGACACCTCGGAAATTTGCGAACCCCGTATCACTGGCGGACATG
GAACATCGCAAACCCGCTTACTCGTCAGGCTGAAATCGCGAACATCGTTGCCAACGTTCAGACGACTGTCCTGCCGTTCT
TTGAGCGTTTTGGTGCTCCACGCGAACTGGCTGAAGAGCTCGCGCATTCTGAAGTTCCAGGTTTCATGTTCCCACAAAAT
GCTGTTCGATTTGTATTCTGGCAGCTTGGTCCGGAGGCAGCGGAAAACTGTATGTCTTATTGGGTCGCGCGCTTACCTTC
ACCGGATGTCTTCCGATCTGAGCGCGACGTCCCCACTCTGCGGGATAGGCTCGCTGCGGGGAGCGATGCCAACAACCTAG
CAAGGGTCGCTCGTACGATGAAGATCGGCCTCAGCCTCTGA

Upstream 100 bases:

>100_bases
TGACCGAGACTGGCTACGTGATGTTTGGAGATCGGGGTCGGGGGTGGAACAGGGGCGGGGCGTAATAGACGCTGGTTTGA
TCGCCTGAGCATTCACCAAG

Downstream 100 bases:

>100_bases
CGTTAGTCCTGCCCCGCCGGCAGCAACCGGAAATCCGGCAGGTCGCGCAGAGCCAATTCCGGGCCGGCGGGGGAGTAGAC
AACGAAAAGCCGCATCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYVELVVHASVYNKAIREWDERN
GWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIANIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQN
AVRFVFWQLGPEAAENCMSYWVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL

Sequences:

>Translated_226_residues
MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYVELVVHASVYNKAIREWDERN
GWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIANIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQN
AVRFVFWQLGPEAAENCMSYWVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL
>Mature_226_residues
MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYVELVVHASVYNKAIREWDERN
GWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIANIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQN
AVRFVFWQLGPEAAENCMSYWVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25612; Mature: 25612

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEECCCCEE
ELVVHASVYNKAIREWDERNGWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIA
EHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHH
NIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQNAVRFVFWQLGPEAAENCMSY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
WVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL
HHHHCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDQEPPRQIFLDACCEISSRLESVGFRFAKSGPHASRRAGDWTFRISFQSNYLNVSGEYV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCEEECCCCEE
ELVVHASVYNKAIREWDERNGWPANGSDWIAGGHLGNLRTPYHWRTWNIANPLTRQAEIA
EHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCHHHHHHHH
NIVANVQTTVLPFFERFGAPRELAEELAHSEVPGFMFPQNAVRFVFWQLGPEAAENCMSY
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
WVARLPSPDVFRSERDVPTLRDRLAAGSDANNLARVARTMKIGLSL
HHHHCCCCHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA