| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472934
Identifier: 13472934
GI number: 13472934
Start: 2719976
End: 2721409
Strand: Reverse
Name: 13472934
Synonym: mll3384
Alternate gene names: NA
Gene position: 2721409-2719976 (Counterclockwise)
Preceding gene: 13472935
Following gene: 13472933
Centisome position: 38.68
GC content: 59.76
Gene sequence:
>1434_bases ATGACGGCGATGACCAAAGTGAAAAGGCTAGCGACAGCCGCAAGCTTCGCTGCCGCGCTACTGGTGGGAGGCGTGACCTA TGCCTCTGCCGAAGAAGTGACGTTGACGATGGCGGTGCCGGATTGGCCCCCGACCCGCATTATGAAGAAGTTCTTCGACG AGCAGTACAAGCCCAAGTCTGGCAATACCGTGAAGCTCGATGTCGACTTCATTCCGTGGCCGGATTTCTACACCCGCGTC AACGCCTCGTTGACCTCGGGCGAAAAGAAGTACAACTTCATCGTGTCGGACTCGCAGTGGCTGGGCGCCTTCGTCGAAGG CGGCTACTTCCGCAAGATCAACGATCTCATCGATGCCGACCCGGAACTCAAGGCGGCGATGGAGTCGATGCATCCCGCCG TGCTCAACGCCTACTCGACCTATCCCAACAGCACGCCGAACTACTACGGCTTCCCGCAGTTCCCGGACGTGCTGGTCACC TACGGCCGCAAGGACGTGCTCTGCAACGACGACGAGCAGGCCGCCTTCAAGGCGAAGTACAATGAGAAGCTGCCCTGCAC CGGCGAAGAAATCGACGCCATGGACTGGAACACGTTCGAGCATGTTGGCGAATTCTTCCAGCGCAAGAAGGGCGACAAGC TCGCCGGCCAGGTGCTGGATGACGATTTCTACGGCATCGCCTATCAGGCAGGCAAAGGCTACGACTTCTCGACGAGCTCG GTCCACACGTTCGTCTGGGAGCATGGCGGCGGCATCTGGGATGAAACCAAGGCCCCGACCGGACATGCCGAAGGCGTCGT AAACTCCCCGAAGTCCATCGAGGGCATGGAGCATTTCCTCAAATTGCTGAAGTACATGCCGCCGGTGGTCAAGACGGGCA CCATGGACATCTTCGTCTCGGACCAGTTGTTCCGTGAAGGCAAGGTGGCCATGAACATCGACTGGATCGGTCTCGGCGAA GCCTCGCTCGATCCCAAGACGTCGAAGGTTGCCGACAAGCTGGTGTTCGGATTGGCGCCAGGCCTGCGCGGCCCCGACGG AAAGGTGAATCGTACGTCACAGATCGGCGGACAGCCTTTCGTTCTCACCACCTGGACGACGCCTGAGCAAATCAAGGAAG CGGTGGGCTTCGTGAAGTGGTGGCTCTCGCCCGATATCCAGCACCAGTTCGCCGCCGCCGGCGGCCAGTCCGCGATCAAG TCGGTCTACAGCGATCCGAAATACGTGACCTATCGTCCGTGGGACCGCGCCTGGGCGAACTCGCTCGACTGGCAGAAGGA CATGTGGCACGTGCCGCAGTTCTTCGAACTGCTCACCCAGCAGCAGGACCAGTACGACCTAGCCATCACTGGCAAGCAGG ACGCCAAGACCACCCTGGATAACATCGCCAAGTTCCAGGAGGACCTCCTGAAGAACGCTGGCCTTATCCAGTAA
Upstream 100 bases:
>100_bases GATAACAGGAAAATCCACGTCTTCCGCGCCGTGAGCGGCCAGGCAATGACCTGACGCGAACGGCGAGAAGCAATCCGGTT AACCAAGGGAGGAAACGCGA
Downstream 100 bases:
>100_bases CCTTCCGACATAGCTGCGGGGAGCGGGCAAAGCCGCTCCCCATCATTGCCACGCCAGGCGCTCCATATTTCGGACTCCCA TGACCGCTGTTTCAAGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MTAMTKVKRLATAASFAAALLVGGVTYASAEEVTLTMAVPDWPPTRIMKKFFDEQYKPKSGNTVKLDVDFIPWPDFYTRV NASLTSGEKKYNFIVSDSQWLGAFVEGGYFRKINDLIDADPELKAAMESMHPAVLNAYSTYPNSTPNYYGFPQFPDVLVT YGRKDVLCNDDEQAAFKAKYNEKLPCTGEEIDAMDWNTFEHVGEFFQRKKGDKLAGQVLDDDFYGIAYQAGKGYDFSTSS VHTFVWEHGGGIWDETKAPTGHAEGVVNSPKSIEGMEHFLKLLKYMPPVVKTGTMDIFVSDQLFREGKVAMNIDWIGLGE ASLDPKTSKVADKLVFGLAPGLRGPDGKVNRTSQIGGQPFVLTTWTTPEQIKEAVGFVKWWLSPDIQHQFAAAGGQSAIK SVYSDPKYVTYRPWDRAWANSLDWQKDMWHVPQFFELLTQQQDQYDLAITGKQDAKTTLDNIAKFQEDLLKNAGLIQ
Sequences:
>Translated_477_residues MTAMTKVKRLATAASFAAALLVGGVTYASAEEVTLTMAVPDWPPTRIMKKFFDEQYKPKSGNTVKLDVDFIPWPDFYTRV NASLTSGEKKYNFIVSDSQWLGAFVEGGYFRKINDLIDADPELKAAMESMHPAVLNAYSTYPNSTPNYYGFPQFPDVLVT YGRKDVLCNDDEQAAFKAKYNEKLPCTGEEIDAMDWNTFEHVGEFFQRKKGDKLAGQVLDDDFYGIAYQAGKGYDFSTSS VHTFVWEHGGGIWDETKAPTGHAEGVVNSPKSIEGMEHFLKLLKYMPPVVKTGTMDIFVSDQLFREGKVAMNIDWIGLGE ASLDPKTSKVADKLVFGLAPGLRGPDGKVNRTSQIGGQPFVLTTWTTPEQIKEAVGFVKWWLSPDIQHQFAAAGGQSAIK SVYSDPKYVTYRPWDRAWANSLDWQKDMWHVPQFFELLTQQQDQYDLAITGKQDAKTTLDNIAKFQEDLLKNAGLIQ >Mature_476_residues TAMTKVKRLATAASFAAALLVGGVTYASAEEVTLTMAVPDWPPTRIMKKFFDEQYKPKSGNTVKLDVDFIPWPDFYTRVN ASLTSGEKKYNFIVSDSQWLGAFVEGGYFRKINDLIDADPELKAAMESMHPAVLNAYSTYPNSTPNYYGFPQFPDVLVTY GRKDVLCNDDEQAAFKAKYNEKLPCTGEEIDAMDWNTFEHVGEFFQRKKGDKLAGQVLDDDFYGIAYQAGKGYDFSTSSV HTFVWEHGGGIWDETKAPTGHAEGVVNSPKSIEGMEHFLKLLKYMPPVVKTGTMDIFVSDQLFREGKVAMNIDWIGLGEA SLDPKTSKVADKLVFGLAPGLRGPDGKVNRTSQIGGQPFVLTTWTTPEQIKEAVGFVKWWLSPDIQHQFAAAGGQSAIKS VYSDPKYVTYRPWDRAWANSLDWQKDMWHVPQFFELLTQQQDQYDLAITGKQDAKTTLDNIAKFQEDLLKNAGLIQ
Specific function: Unknown
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53440; Mature: 53309
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAMTKVKRLATAASFAAALLVGGVTYASAEEVTLTMAVPDWPPTRIMKKFFDEQYKPKS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC GNTVKLDVDFIPWPDFYTRVNASLTSGEKKYNFIVSDSQWLGAFVEGGYFRKINDLIDAD CCEEEEEEEEECCCHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHCCC PELKAAMESMHPAVLNAYSTYPNSTPNYYGFPQFPDVLVTYGRKDVLCNDDEQAAFKAKY HHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCC NEKLPCTGEEIDAMDWNTFEHVGEFFQRKKGDKLAGQVLDDDFYGIAYQAGKGYDFSTSS CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCC VHTFVWEHGGGIWDETKAPTGHAEGVVNSPKSIEGMEHFLKLLKYMPPVVKTGTMDIFVS EEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCEEEEEC DQLFREGKVAMNIDWIGLGEASLDPKTSKVADKLVFGLAPGLRGPDGKVNRTSQIGGQPF HHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCE VLTTWTTPEQIKEAVGFVKWWLSPDIQHQFAAAGGQSAIKSVYSDPKYVTYRPWDRAWAN EEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCEEEECCCHHHHHC SLDWQKDMWHVPQFFELLTQQQDQYDLAITGKQDAKTTLDNIAKFQEDLLKNAGLIQ CCCCHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAMTKVKRLATAASFAAALLVGGVTYASAEEVTLTMAVPDWPPTRIMKKFFDEQYKPKS CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC GNTVKLDVDFIPWPDFYTRVNASLTSGEKKYNFIVSDSQWLGAFVEGGYFRKINDLIDAD CCEEEEEEEEECCCHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHCCC PELKAAMESMHPAVLNAYSTYPNSTPNYYGFPQFPDVLVTYGRKDVLCNDDEQAAFKAKY HHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCC NEKLPCTGEEIDAMDWNTFEHVGEFFQRKKGDKLAGQVLDDDFYGIAYQAGKGYDFSTSS CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCC VHTFVWEHGGGIWDETKAPTGHAEGVVNSPKSIEGMEHFLKLLKYMPPVVKTGTMDIFVS EEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCCCCEEEEEC DQLFREGKVAMNIDWIGLGEASLDPKTSKVADKLVFGLAPGLRGPDGKVNRTSQIGGQPF HHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCE VLTTWTTPEQIKEAVGFVKWWLSPDIQHQFAAAGGQSAIKSVYSDPKYVTYRPWDRAWAN EEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHCCCCEEEECCCHHHHHC SLDWQKDMWHVPQFFELLTQQQDQYDLAITGKQDAKTTLDNIAKFQEDLLKNAGLIQ CCCCHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA