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The map label for this gene is ycjP [C]

Identifier: 13472932

GI number: 13472932

Start: 2717893

End: 2718831

Strand: Reverse

Name: ycjP [C]

Synonym: mll3381

Alternate gene names: 13472932

Gene position: 2718831-2717893 (Counterclockwise)

Preceding gene: 13472933

Following gene: 13472931

Centisome position: 38.64

GC content: 60.28

Gene sequence:

>939_bases
GTGGCCGAATCGATATTGGGAAAGCTCGGCTTCGGCAGGGCCAGCGGAGTAGACAAGGCCGGCTGGGGGCGGACGCTCGC
CGTGGCCATCGTCGCCTTTATCTATTTTCTGCCGGTGCTGTTCATCATATTCACCGCCTTCAAACCGCAGGGCGACGCGC
TCCTGGTGCCTCCGACGCTGTCGCCCACGTCGCTGTTCGGCTTGATTCCGGACCATTTTGTGTTCAAGCCCACGCTCGAA
AATTTTGGGTCCGTCTTTTCCCGCTCGATGACGCCGGACGGTGCCCCGGAAGCGACAGGATTCGACCGTTATTTCTTCAA
CTCGATCTTCATCGCCTCGGCGTCGGTGCTGCTGGCGCTGGTCATCGGCACCCTGGCGGCCTTCGGCTTCTCGCGCTATC
CGCTGAAAGGCAATGACACCTACCTGTTCATCATCCTGACCACGCGCATGCTGCCGGCGATTGTGGTGATCATTCCGGTG
ATCCTGATGTTCCGCGTAGTGGGCCTGTCGGGCTCGTATCTCGGCATCATCATGCTCTACACCGCCTTCAACCTGGCCTT
CACCATCTGGATGATGAAGAGCTTCTTCGATGAATTGTCGCCAGACGTCGAGGATGCCGCCCGCCTCGACGGATCGTCCG
GAATGCGGGTGTTCTTCAAGATTTGCCTGCCCCAGGTCATTGCCGGGCTCGCCGCCACGTTCGTGTTCGGCCTGATCCTC
ACCTGGAACGAGTTCCTCTTCGCCCTGTTGCTCTCGGGGCCCGACACGAGAACGGTCCCGGTCGCCATGAACCAGGCCGT
GTCGTCGGGTGGACGCGGCACCGACTGGACTTTGCTTGCCGCCATCGAAACCCTGTTCCTCGTCCCAGTCTTCCTGGTCA
CGTTCTTCTTGCAAAACCATCTGTTGCGCGGCGTTACCTTCGGCACCGTGAAGCGCTAA

Upstream 100 bases:

>100_bases
TGAGGGCGCGGCGATCTCCTATCTGATGCTGTTCATGGTGATCGTTCTCACCAACCTCTACCTGTACCTCGCAAACCGCC
GTACGAAGGGAGCCTGACCC

Downstream 100 bases:

>100_bases
GATGTCAACCATCGAACTCCGCAAAGTCACCAAGCGTTTCGGCTCCTTCACCGCGGTCAAGGACGTTGACCTGTCGGTGG
CCGCCGGTGAGGTCGTCTGC

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAESILGKLGFGRASGVDKAGWGRTLAVAIVAFIYFLPVLFIIFTAFKPQGDALLVPPTLSPTSLFGLIPDHFVFKPTLE
NFGSVFSRSMTPDGAPEATGFDRYFFNSIFIASASVLLALVIGTLAAFGFSRYPLKGNDTYLFIILTTRMLPAIVVIIPV
ILMFRVVGLSGSYLGIIMLYTAFNLAFTIWMMKSFFDELSPDVEDAARLDGSSGMRVFFKICLPQVIAGLAATFVFGLIL
TWNEFLFALLLSGPDTRTVPVAMNQAVSSGGRGTDWTLLAAIETLFLVPVFLVTFFLQNHLLRGVTFGTVKR

Sequences:

>Translated_312_residues
MAESILGKLGFGRASGVDKAGWGRTLAVAIVAFIYFLPVLFIIFTAFKPQGDALLVPPTLSPTSLFGLIPDHFVFKPTLE
NFGSVFSRSMTPDGAPEATGFDRYFFNSIFIASASVLLALVIGTLAAFGFSRYPLKGNDTYLFIILTTRMLPAIVVIIPV
ILMFRVVGLSGSYLGIIMLYTAFNLAFTIWMMKSFFDELSPDVEDAARLDGSSGMRVFFKICLPQVIAGLAATFVFGLIL
TWNEFLFALLLSGPDTRTVPVAMNQAVSSGGRGTDWTLLAAIETLFLVPVFLVTFFLQNHLLRGVTFGTVKR
>Mature_311_residues
AESILGKLGFGRASGVDKAGWGRTLAVAIVAFIYFLPVLFIIFTAFKPQGDALLVPPTLSPTSLFGLIPDHFVFKPTLEN
FGSVFSRSMTPDGAPEATGFDRYFFNSIFIASASVLLALVIGTLAAFGFSRYPLKGNDTYLFIILTTRMLPAIVVIIPVI
LMFRVVGLSGSYLGIIMLYTAFNLAFTIWMMKSFFDELSPDVEDAARLDGSSGMRVFFKICLPQVIAGLAATFVFGLILT
WNEFLFALLLSGPDTRTVPVAMNQAVSSGGRGTDWTLLAAIETLFLVPVFLVTFFLQNHLLRGVTFGTVKR

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=290, Percent_Identity=26.551724137931, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789860, Length=230, Percent_Identity=28.695652173913, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790464, Length=215, Percent_Identity=26.9767441860465, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34025; Mature: 33893

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESILGKLGFGRASGVDKAGWGRTLAVAIVAFIYFLPVLFIIFTAFKPQGDALLVPPTL
CCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
SPTSLFGLIPDHFVFKPTLENFGSVFSRSMTPDGAPEATGFDRYFFNSIFIASASVLLAL
CHHHHHHCCCCHHEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIGTLAAFGFSRYPLKGNDTYLFIILTTRMLPAIVVIIPVILMFRVVGLSGSYLGIIMLY
HHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TAFNLAFTIWMMKSFFDELSPDVEDAARLDGSSGMRVFFKICLPQVIAGLAATFVFGLIL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TWNEFLFALLLSGPDTRTVPVAMNQAVSSGGRGTDWTLLAAIETLFLVPVFLVTFFLQNH
HHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLRGVTFGTVKR
HHHCCCHHCCCC
>Mature Secondary Structure 
AESILGKLGFGRASGVDKAGWGRTLAVAIVAFIYFLPVLFIIFTAFKPQGDALLVPPTL
CHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC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HHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]