| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472920
Identifier: 13472920
GI number: 13472920
Start: 2707702
End: 2708091
Strand: Direct
Name: 13472920
Synonym: mlr3368
Alternate gene names: NA
Gene position: 2707702-2708091 (Clockwise)
Preceding gene: 13472919
Following gene: 13472922
Centisome position: 38.48
GC content: 62.05
Gene sequence:
>390_bases ATGTCCAGTTTTCGCCTCGCCTTCCTGATTGCCGCAACCTCGTCGATCGGCCCCTTGCCGGCATTCGCCGCGGCTCAGAG CAGCTATGTCTATTGCGACAATGGGCTGCGCTGCTTCAAGGCTCCCTGCCCGTCGAACAGCGCGCTCGACCTTGCCACCG GCAAGATCGTCAAGGGCGTGTCGATCGACGCCAGCCAACTGCCGCAGGCCGACAAAGCGATAACGGACCAGTCCGACGTG CTCTACAGCGGCAAGATCGTCGTCAGGGGCTCGATCGAGCAGCGTACCCAGAGCATCACAGGCAAGGACTATAGCCTGCC ATGGCTGGTCGCGACCCGTATCGTACGCACCGCCAAGGACAGCGAACGCAAGCACTGTTCATCGCCCTGA
Upstream 100 bases:
>100_bases AATCTGCGCAATCCGGAAGCGGTCGATCACTACCGGCAGCGCTTTCCGCTCGACCTATAGCAATCGCGGTTTCGCCCCAA TTCTCCGCGACGTTGCAGCC
Downstream 100 bases:
>100_bases TCCGCGATTGCGATTCACGACTGGTCAGCCACCAAGCAGCCGTTCCACTTCGGCGGCTATCCGCAGCAGACGCCGGTCAT GGCCGTTGCGCGCCACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGVSIDASQLPQADKAITDQSDV LYSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKDSERKHCSSP
Sequences:
>Translated_129_residues MSSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGVSIDASQLPQADKAITDQSDV LYSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKDSERKHCSSP >Mature_128_residues SSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGVSIDASQLPQADKAITDQSDVL YSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKDSERKHCSSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13785; Mature: 13654
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGV CCCCEEEEEEEECCCCCCCCCHHHCCCCEEEECCCCEEEECCCCCCCCEECCCCCEEECC SIDASQLPQADKAITDQSDVLYSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKD CCCHHHCCCCCHHCCCCCCEEEECEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC SERKHCSSP CCCCCCCCC >Mature Secondary Structure SSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGV CCCEEEEEEEECCCCCCCCCHHHCCCCEEEECCCCEEEECCCCCCCCEECCCCCEEECC SIDASQLPQADKAITDQSDVLYSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKD CCCHHHCCCCCHHCCCCCCEEEECEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC SERKHCSSP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA