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The map label for this gene is ydgJ [C]

Identifier: 13472914

GI number: 13472914

Start: 2701128

End: 2702315

Strand: Reverse

Name: ydgJ [C]

Synonym: mll3361

Alternate gene names: 13472914

Gene position: 2702315-2701128 (Counterclockwise)

Preceding gene: 13472915

Following gene: 13472913

Centisome position: 38.41

GC content: 65.4

Gene sequence:

>1188_bases
ATGGTCGGCGCATCGAAATCGGAAACGGGAGGCGGCCCGATCCGCTATGGTATGGTCGGCGGCGGGCAAGGCGCCTTCAT
CGGCGCGGTGCACCGCATCGCGGCGCGCCTGGACAATGAGTTCGTGCTGGTGGCTGGTGCGCTTTCGGCGAACCCCGAGC
GCGCCAAGGCTTCAGCCGCCGAACTCGGGCTCGATCCGGACCGTAGCTACGCTTCCTATGCCGAGATGGCCAAGGCCGAG
GCCAAGCGCCCCGACGGCATCGAGGCGGTGGCCATCGTCACGCCCAACAATGTCCATGTGCCGGCTGCCAAGGCCTTCCT
CGAGTCCGGCATCCACGTGATCTGCGACAAGCCGCTGGCGACGACACTGGCCGAGGCAAAAAAGCTCGCGGCGATCGTCG
AGAAGACCGGCAAGGTGTTCGTGCTCACCCATAACTACACCGCCTATCCGATGGTGCGGCAGGCGCGCGAAATGGTAGCC
AAGGGTATACTTGGCGACATCCGCATCGTGCAGTCGGAATATCCGCAGGACTGGCTGACCGAGGATCTCGCAGCCACCGG
CCAGAAGCAGGCCTCATGGCGAGGCGATCCCAAGCAGGCGGGCGCCGGCGGCGCGCTGGGCGACATCGGCACCCATGCCT
ACAATCTCGCCCGCTTCGTCTCCGGGCTGGAGCTGGATTCGCTGTCGGCCGATCTCGATGCCTTCGTGCCGGGGCGGCTG
CTCGACGACAATGTCAACGTCATGCTGCGCTTCAAGCCCACCGGCAAGACGCATCCGGCCAAGGGCATGATCTGGGCCAG
CCAGGTGGCGCCGGGCCACGAGAACGGGCTGAAGCTGCGCATCTATGGCTCGAAGGGCGGGCTGGAATGGGTGCAGGCCG
ATCCGAACTATCTCTGGTACACGCCGTTCGGCCAGCCCAAGCAGTTGATCACCCGCAACGGCGCCGGCGCGCTGCCGGTG
GCGGGCCGTGTCAGCCGCGTGCCGTCAGGCCATCCCGAGGGCTATCTCGAAGGCTTCGCCAACATCTATCAGGAGGCCGC
ACGCGCCATTCGTGCGGCGCGCAAGAAGGGTGGCAAGCCGGCAAGGGACGTCATCTTCCCGACCATCCAGGATGGCGTCG
AAGGCATGGCCTTCATCGAAGCCTGCGTGAAATCGTCGAAGAAGAATGGAGCGTGGACCAAGCTCTAA

Upstream 100 bases:

>100_bases
CGGCGCGACGGACAAGAAAGTGCTGCGCGCGATGATGGGAATTTGACAGGGCTTTCCCTCCCCTTCAGGGGAGGAGCATC
CAAGACACGAGGGAGAAAAC

Downstream 100 bases:

>100_bases
AACAAAAATGATCCGGGGGGATCAAACGGGGGGGGAGGGCCGTCGATGAAAATCGGCATGTGCATGTTTTTGTGGACGAC
GGCGGTGTCGAAGAAGCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MVGASKSETGGGPIRYGMVGGGQGAFIGAVHRIAARLDNEFVLVAGALSANPERAKASAAELGLDPDRSYASYAEMAKAE
AKRPDGIEAVAIVTPNNVHVPAAKAFLESGIHVICDKPLATTLAEAKKLAAIVEKTGKVFVLTHNYTAYPMVRQAREMVA
KGILGDIRIVQSEYPQDWLTEDLAATGQKQASWRGDPKQAGAGGALGDIGTHAYNLARFVSGLELDSLSADLDAFVPGRL
LDDNVNVMLRFKPTGKTHPAKGMIWASQVAPGHENGLKLRIYGSKGGLEWVQADPNYLWYTPFGQPKQLITRNGAGALPV
AGRVSRVPSGHPEGYLEGFANIYQEAARAIRAARKKGGKPARDVIFPTIQDGVEGMAFIEACVKSSKKNGAWTKL

Sequences:

>Translated_395_residues
MVGASKSETGGGPIRYGMVGGGQGAFIGAVHRIAARLDNEFVLVAGALSANPERAKASAAELGLDPDRSYASYAEMAKAE
AKRPDGIEAVAIVTPNNVHVPAAKAFLESGIHVICDKPLATTLAEAKKLAAIVEKTGKVFVLTHNYTAYPMVRQAREMVA
KGILGDIRIVQSEYPQDWLTEDLAATGQKQASWRGDPKQAGAGGALGDIGTHAYNLARFVSGLELDSLSADLDAFVPGRL
LDDNVNVMLRFKPTGKTHPAKGMIWASQVAPGHENGLKLRIYGSKGGLEWVQADPNYLWYTPFGQPKQLITRNGAGALPV
AGRVSRVPSGHPEGYLEGFANIYQEAARAIRAARKKGGKPARDVIFPTIQDGVEGMAFIEACVKSSKKNGAWTKL
>Mature_395_residues
MVGASKSETGGGPIRYGMVGGGQGAFIGAVHRIAARLDNEFVLVAGALSANPERAKASAAELGLDPDRSYASYAEMAKAE
AKRPDGIEAVAIVTPNNVHVPAAKAFLESGIHVICDKPLATTLAEAKKLAAIVEKTGKVFVLTHNYTAYPMVRQAREMVA
KGILGDIRIVQSEYPQDWLTEDLAATGQKQASWRGDPKQAGAGGALGDIGTHAYNLARFVSGLELDSLSADLDAFVPGRL
LDDNVNVMLRFKPTGKTHPAKGMIWASQVAPGHENGLKLRIYGSKGGLEWVQADPNYLWYTPFGQPKQLITRNGAGALPV
AGRVSRVPSGHPEGYLEGFANIYQEAARAIRAARKKGGKPARDVIFPTIQDGVEGMAFIEACVKSSKKNGAWTKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=212, Percent_Identity=27.8301886792453, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787574, Length=224, Percent_Identity=29.0178571428571, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41984; Mature: 41984

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGASKSETGGGPIRYGMVGGGQGAFIGAVHRIAARLDNEFVLVAGALSANPERAKASAA
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
ELGLDPDRSYASYAEMAKAEAKRPDGIEAVAIVTPNNVHVPAAKAFLESGIHVICDKPLA
HCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEECCHHH
TTLAEAKKLAAIVEKTGKVFVLTHNYTAYPMVRQAREMVAKGILGDIRIVQSEYPQDWLT
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHEEEEHHCCCHHHHH
EDLAATGQKQASWRGDPKQAGAGGALGDIGTHAYNLARFVSGLELDSLSADLDAFVPGRL
HHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCCCEE
LDDNVNVMLRFKPTGKTHPAKGMIWASQVAPGHENGLKLRIYGSKGGLEWVQADPNYLWY
ECCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEE
TPFGQPKQLITRNGAGALPVAGRVSRVPSGHPEGYLEGFANIYQEAARAIRAARKKGGKP
CCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ARDVIFPTIQDGVEGMAFIEACVKSSKKNGAWTKL
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVGASKSETGGGPIRYGMVGGGQGAFIGAVHRIAARLDNEFVLVAGALSANPERAKASAA
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
ELGLDPDRSYASYAEMAKAEAKRPDGIEAVAIVTPNNVHVPAAKAFLESGIHVICDKPLA
HCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEECCHHH
TTLAEAKKLAAIVEKTGKVFVLTHNYTAYPMVRQAREMVAKGILGDIRIVQSEYPQDWLT
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHEEEEHHCCCHHHHH
EDLAATGQKQASWRGDPKQAGAGGALGDIGTHAYNLARFVSGLELDSLSADLDAFVPGRL
HHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCCCEE
LDDNVNVMLRFKPTGKTHPAKGMIWASQVAPGHENGLKLRIYGSKGGLEWVQADPNYLWY
ECCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEE
TPFGQPKQLITRNGAGALPVAGRVSRVPSGHPEGYLEGFANIYQEAARAIRAARKKGGKP
CCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ARDVIFPTIQDGVEGMAFIEACVKSSKKNGAWTKL
HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]