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The map label for this gene is ycjR [C]

Identifier: 13472913

GI number: 13472913

Start: 2700231

End: 2701082

Strand: Reverse

Name: ycjR [C]

Synonym: mll3360

Alternate gene names: 13472913

Gene position: 2701082-2700231 (Counterclockwise)

Preceding gene: 13472914

Following gene: 13472898

Centisome position: 38.39

GC content: 60.68

Gene sequence:

>852_bases
ATGAAAATCGGCATGTGCATGTTTTTGTGGACGACGGCGGTGTCGAAGAAGCATGAGCCATTGCTTCGCGACATCAAGGC
GACGGGCTTCGACGGTGTCGAAATACCGATCTTCGCCGGCATGCCGGACGATTATAAAAAGCTCGGCGACCTGCTCGATC
GCATCGGGCTGGAGCGGACCGCGGTCTCGGCGATGGGCGATCCCACGATGAACCTGATCTCGGCCGATGCGGGAACGCGC
AAGGCCGGTATCGCTTACATGAAATGGGCTGTTGATTGTGCCGATGCGCTTGGCGCCAGAACGCTCAGCGGACCGCTGCA
CTCGACGCTCGGCGCCTTTTCCGGCAGCGGGCCGACACCCGCCGAGAAGAACCGTTCCATCGCCTCGCAGCGCGCCATCG
GCGACCATGCCGGCACGCGCAACGTGACCATCGGGCTGGAGGCGCTGAACCGCTTCGAATGTTATCTTTTCAACACGATG
GCGGACCTGTCGGAGCACATCGATGCCGTCGGCCGACCGCACATCAAGGCGATGTACGACACCTTTCATGCCAATATCGA
GGAGGCCGACCCGATCGGCGCCTATACTAAGCATCGCCGGAATGTCGTGCACATCCACATATCAGAGAACGATCGCGGCG
TGCCGGGACGCGGCAACATCCCGTGGAAAGAGACGTTCGCGGCGATCCGCAAGAGCGGCTATGACGACTGGCTGACTATC
GAGGCGTTCGGGCGGTCGCTGAAGGATCTGGCGGCGGCGACCAAGGTTTGGCGCGATTTTTCCGAAACGCCGGAAGCGGT
TTATCGCGAGGGGTATAAGCATATCAGGAATGGGTGGAAGAAGGCGGCTTAG

Upstream 100 bases:

>100_bases
CATCGAAGCCTGCGTGAAATCGTCGAAGAAGAATGGAGCGTGGACCAAGCTCTAAAACAAAAATGATCCGGGGGGATCAA
ACGGGGGGGGAGGGCCGTCG

Downstream 100 bases:

>100_bases
GCTCCTCTCTTCGTCATCCACGGGCGGAGCGGGAGCGAAGCGGACGCGGAGACCCGAGGATCCATGCCGCGACATTCGAG
CGCCGCAGCGGTGCTGACAG

Product: D-tagatose 3-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKIGMCMFLWTTAVSKKHEPLLRDIKATGFDGVEIPIFAGMPDDYKKLGDLLDRIGLERTAVSAMGDPTMNLISADAGTR
KAGIAYMKWAVDCADALGARTLSGPLHSTLGAFSGSGPTPAEKNRSIASQRAIGDHAGTRNVTIGLEALNRFECYLFNTM
ADLSEHIDAVGRPHIKAMYDTFHANIEEADPIGAYTKHRRNVVHIHISENDRGVPGRGNIPWKETFAAIRKSGYDDWLTI
EAFGRSLKDLAAATKVWRDFSETPEAVYREGYKHIRNGWKKAA

Sequences:

>Translated_283_residues
MKIGMCMFLWTTAVSKKHEPLLRDIKATGFDGVEIPIFAGMPDDYKKLGDLLDRIGLERTAVSAMGDPTMNLISADAGTR
KAGIAYMKWAVDCADALGARTLSGPLHSTLGAFSGSGPTPAEKNRSIASQRAIGDHAGTRNVTIGLEALNRFECYLFNTM
ADLSEHIDAVGRPHIKAMYDTFHANIEEADPIGAYTKHRRNVVHIHISENDRGVPGRGNIPWKETFAAIRKSGYDDWLTI
EAFGRSLKDLAAATKVWRDFSETPEAVYREGYKHIRNGWKKAA
>Mature_283_residues
MKIGMCMFLWTTAVSKKHEPLLRDIKATGFDGVEIPIFAGMPDDYKKLGDLLDRIGLERTAVSAMGDPTMNLISADAGTR
KAGIAYMKWAVDCADALGARTLSGPLHSTLGAFSGSGPTPAEKNRSIASQRAIGDHAGTRNVTIGLEALNRFECYLFNTM
ADLSEHIDAVGRPHIKAMYDTFHANIEEADPIGAYTKHRRNVVHIHISENDRGVPGRGNIPWKETFAAIRKSGYDDWLTI
EAFGRSLKDLAAATKVWRDFSETPEAVYREGYKHIRNGWKKAA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hyi family [H]

Homologues:

Organism=Escherichia coli, GI87081874, Length=235, Percent_Identity=24.6808510638298, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 31165; Mature: 31165

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGMCMFLWTTAVSKKHEPLLRDIKATGFDGVEIPIFAGMPDDYKKLGDLLDRIGLERT
CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHH
AVSAMGDPTMNLISADAGTRKAGIAYMKWAVDCADALGARTLSGPLHSTLGAFSGSGPTP
HHHHCCCCCHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCCCCCC
AEKNRSIASQRAIGDHAGTRNVTIGLEALNRFECYLFNTMADLSEHIDAVGRPHIKAMYD
CHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TFHANIEEADPIGAYTKHRRNVVHIHISENDRGVPGRGNIPWKETFAAIRKSGYDDWLTI
HHHCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEH
EAFGRSLKDLAAATKVWRDFSETPEAVYREGYKHIRNGWKKAA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIGMCMFLWTTAVSKKHEPLLRDIKATGFDGVEIPIFAGMPDDYKKLGDLLDRIGLERT
CCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHH
AVSAMGDPTMNLISADAGTRKAGIAYMKWAVDCADALGARTLSGPLHSTLGAFSGSGPTP
HHHHCCCCCHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHCCCCCCCC
AEKNRSIASQRAIGDHAGTRNVTIGLEALNRFECYLFNTMADLSEHIDAVGRPHIKAMYD
CHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TFHANIEEADPIGAYTKHRRNVVHIHISENDRGVPGRGNIPWKETFAAIRKSGYDDWLTI
HHHCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEH
EAFGRSLKDLAAATKVWRDFSETPEAVYREGYKHIRNGWKKAA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]